Pairwise Alignments

Query, 566 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 272 a.a., ABC transporter permease from Dickeya dianthicola ME23

 Score = 60.1 bits (144), Expect = 1e-13
 Identities = 50/210 (23%), Positives = 97/210 (46%), Gaps = 8/210 (3%)

Query: 303 LLFTISGAMIPLTLIWSLAQRWRFPDL-FPTQWTGQFWYD-EWPNVLHNMETSVLLALGS 360
           LLF I   ++ + L ++      +P   F  +W  +F++  EW + L N   S+L+A  +
Sbjct: 24  LLFLIVPVLVIVPLSFNAGSFLSYPLAGFSLRWYREFFHSSEWLSALGN---SLLIAPLA 80

Query: 361 GSLALLLGILAQEYRLHTQ---RAIPVYIIALPMLLPQLSLLFGIQVLTLLMASQAYTWW 417
            +LA  LG+LA    +  +   +++ + ++  PM+ P + +  G+      ++       
Sbjct: 81  TALATGLGVLASVGLVRGEFRGKSLVMAVLISPMIAPVVIVAVGMFFFFAKLSLLNSYIG 140

Query: 418 VVWAHTFFAFPLVYLALSGPWQSYNSNFSKIARSLGKSEWQIFWKIKLPLLFPALLYAWA 477
           +V AH     P V + ++   ++Y+ N ++ A SLG      F K+ LPL+ P +     
Sbjct: 141 LVLAHAVLGVPFVVITVTAVLKNYDQNLTRAAASLGAPPLLAFRKVTLPLIAPGVFSGAL 200

Query: 478 VGISVSLAQYLPTLMLGGGRLTTITTEAVA 507
              + S  + + TL L   R  T+  +  A
Sbjct: 201 FAFATSFDEVIVTLFLASPRQRTLPLQMFA 230



 Score = 35.4 bits (80), Expect = 3e-06
 Identities = 66/271 (24%), Positives = 116/271 (42%), Gaps = 39/271 (14%)

Query: 10  ILLCVAPILPGLAGVLISASGYL--PVLGHHHVSWQGFSQVWQW-QGVEYALLLSVTSTL 66
           +L  + P+L  +  +  +A  +L  P+ G     ++ F    +W   +  +LL++  +T 
Sbjct: 24  LLFLIVPVLV-IVPLSFNAGSFLSYPLAGFSLRWYREFFHSSEWLSALGNSLLIAPLATA 82

Query: 67  FSTYLALLMSFAILQRFWFHPRWKRIENSLSILLALPHVAFAIGFASLFASTGWLARLLY 126
            +T L +L S  ++ R  F  +   +   +S ++A P V  A+G    FA    L     
Sbjct: 83  LATGLGVLASVGLV-RGEFRGKSLVMAVLISPMIA-PVVIVAVGMFFFFAKLSLL----- 135

Query: 127 YGFELRDNSHEVTWLVHDPYAIGLTIALALKEVPFILLISLPILQQL--NLTKMKMLSAS 184
                  NS+           IGL +A A+  VPF+++    +L+    NLT+    +AS
Sbjct: 136 -------NSY-----------IGLVLAHAVLGVPFVVITVTAVLKNYDQNLTR---AAAS 174

Query: 185 LGYSEPQMWWKIVFPQWLRKIRFTLFAVAAYAISV-VDFSLVLGPTTPPTFSVLVWQWFN 243
           LG      + K+  P     I   +F+ A +A +   D  +V      P    L  Q F 
Sbjct: 175 LGAPPLLAFRKVTLP----LIAPGVFSGALFAFATSFDEVIVTLFLASPRQRTLPLQMFA 230

Query: 244 EPDLNLLPRAASGAVVLLLLASIVLVAIVAL 274
               NL P  A+ A +++  A ++LV +  L
Sbjct: 231 GIRENLDPTIAAAATMMVSAALVLLVVMEVL 261