Pairwise Alignments

Query, 566 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 281 a.a., putrescine ABC transporter permease from Escherichia coli BL21

 Score = 60.8 bits (146), Expect = 6e-14
 Identities = 61/269 (22%), Positives = 118/269 (43%), Gaps = 25/269 (9%)

Query: 300 ILTLLFTISGAMIPLTLIWS-----LAQRWRFPDLFPTQWTGQFWYDEWPNVLHNMETSV 354
           IL L FT   A + + +I+S     L   W     + T+W G+   D+   ++  +  S+
Sbjct: 15  ILLLGFTFLYAPMLMLVIYSFNSSKLVTVWAG---WSTRWYGELLRDD--AMMSAVGLSL 69

Query: 355 LLALGSGSLALLLGILAQEYRLHTQRAIP----VYIIALPMLLPQLSLLFGIQVLTLLMA 410
            +A  + + A +LG +A    +   R        ++I  P+++P +  + G+ +L L +A
Sbjct: 70  TIAACAATAAAILGTIAAVVLVRFGRFRGSNGFAFMITAPLVMPDV--ITGLSLLLLFVA 127

Query: 411 SQAYTWW-------VVW-AHTFFAFPLVYLALSGPWQSYNSNFSKIARSLGKSEWQIFWK 462
                 W        +W AH  F    V + +S   +  +S+  + A  LG +  ++F+ 
Sbjct: 128 LAHAIGWPADRGMLTIWLAHVTFCTAYVTVVISSRLRELDSSIEEAAMDLGATPLKVFFV 187

Query: 463 IKLPLLFPALLYAWAVGISVSLAQYLPTLMLGGGRLTTITTEAV-ALSSGYDRRVTAIYA 521
           I LP++ PA++  W +  ++SL   +    + G   TT+      ++  G +  + A+  
Sbjct: 188 ITLPMIMPAIISGWLLAFTLSLDDLVIASFVSGPGATTLPMLVFSSVRMGVNPEINALAT 247

Query: 522 LCQALLPFVFFSIALLLGRMQIHRYRAAQ 550
           L    +  V F    L+ R +  R R  Q
Sbjct: 248 LILGAVGIVGFIAWYLMARAEKQRIRDIQ 276