Pairwise Alignments

Query, 566 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 263 a.a., ABC transporter membrane spanning protein (putrescine) from Agrobacterium fabrum C58

 Score = 52.0 bits (123), Expect = 3e-11
 Identities = 44/197 (22%), Positives = 89/197 (45%), Gaps = 10/197 (5%)

Query: 311 MIPLTLIWSLAQRWRFPDLFP-TQWTGQFWYDEWPNVLHNMETSVLLA-------LGSGS 362
           ++PL L+ +++ +      FP + WT   WY +       +E SV  A       +G+  
Sbjct: 25  LLPLALMMAMSFKDANFIAFPISNWTLD-WYGKVLQDKQFIEASVYSAGIALATTIGATV 83

Query: 363 LALLLGILAQEYRLHTQRAIPVYIIALPMLLPQLSLLFGIQVLTLLMASQAYTWWVVWAH 422
           + + + +L     +   +AI   +  LP ++P L     +++   ++     T+ ++ +H
Sbjct: 84  IGVWIALLISTEGIRG-KAILFALACLPAVVPGLINAISMRIFIRMVDIPTGTFAIILSH 142

Query: 423 TFFAFPLVYLALSGPWQSYNSNFSKIARSLGKSEWQIFWKIKLPLLFPALLYAWAVGISV 482
           T  A P V + +    +S  +N    AR LG   +  F ++ +P + PAL+      +  
Sbjct: 143 TVHAVPFVVIMVLTRLRSMPANLVDAARDLGADAFVAFMRVTVPYILPALIGGMIFCVLT 202

Query: 483 SLAQYLPTLMLGGGRLT 499
           S+  ++ T  LGG + T
Sbjct: 203 SIDDFVRTFFLGGYKPT 219