Pairwise Alignments

Query, 566 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 287 a.a., ABC transporter permease from Agrobacterium fabrum C58

 Score = 54.7 bits (130), Expect = 5e-12
 Identities = 53/273 (19%), Positives = 110/273 (40%), Gaps = 15/273 (5%)

Query: 269 VAIVALEWLFTRGYRAWQSSGRSHFPLPHKSILTLLFTISGAMIPLTLIWSLAQRWRFPD 328
           ++++ +E   T   RA+    R    +     LTL   +    + L  +WS+A  W  P 
Sbjct: 1   MSVITIEPAITPRRRAFTPEDRIFVSIGLYGTLTLAIALP---LALMFLWSIADGWSPPL 57

Query: 329 LFPTQWTGQFWYDEWPNV------LHNMETSVLLALGSGSLALLLGILAQEYRLHTQRAI 382
           + P  +T   W     +       ++++  ++++   + ++AL        +    +R +
Sbjct: 58  VVPKDYTTARWAGILGDASLIRAAINSIVIAIVVTFLTAAIALPTAWAMARFPFRLKRLV 117

Query: 383 PVYIIALPMLLPQLSLLFGIQVLTLLMASQAYTWWVVWAHTFFAFPLVYLALSGPWQSYN 442
            ++I+A P+++P L +  GI  + LL         V+        PL+   ++   ++  
Sbjct: 118 EIFILA-PIIIPGLVVAVGIGQVFLLFGLAYSVTGVILVQIVGTLPLMIRLMTAALETIP 176

Query: 443 SNFSKIARSLGKSEWQIFWKIKLPLLFPALLYAWAVGISVSLAQYLPTLMLGGGRLTTIT 502
            +    ARSLG     I   I LPL  P LL    +    S  ++  + ++G   + T+ 
Sbjct: 177 DDLIHAARSLGAGTVGIVLHIILPLAVPGLLAGGLMSFIGSFEEFDKSFIVGAPVVETLP 236

Query: 503 TEAVALSSGYDRR-----VTAIYALCQALLPFV 530
            +       Y  +     + +   L  AL+ F+
Sbjct: 237 IKLYMYLDPYSMQLPLASIVSFILLLPALIVFI 269