Pairwise Alignments
Query, 566 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056
Subject, 277 a.a., ABC transporter permease from Agrobacterium fabrum C58
Score = 57.8 bits (138), Expect = 5e-13
Identities = 52/220 (23%), Positives = 109/220 (49%), Gaps = 27/220 (12%)
Query: 58 LLLSVTSTLFSTYLALLMSFAILQRFWFHPRWKRIENSLSILLALPHVAFAIGFASLFAS 117
+L ++ +TLF+ + +++ +L R+ F P W+ ++ + + ALP I +LFA
Sbjct: 64 VLCALAATLFNVVFGVALAW-VLTRYRF-PGWRIVDAIVDLPFALPTAVAGIALTTLFAG 121
Query: 118 TGWLARLLY-YGFELRDNSHEVTWLVHDPYAIGLTIALALKEVPFILLISLPILQQLNLT 176
GW LL G + + + P +G+ +A+A +PFI+ P+L+ L+
Sbjct: 122 NGWFGSLLAPLGIK----------VAYTP--VGIMVAMAFTSLPFIVRTVQPVLEDLD-P 168
Query: 177 KMKMLSASLGYSEPQMWWKIVFPQWLRKIRFTLFAVAAYAISVVDFSLVL-----GPTTP 231
++ + SLG S+ +++ KI+ P + L ++A S+ +F ++ P +
Sbjct: 169 ALEEAAQSLGGSDLEVFRKIILPLLTPALLAGL--SLSFARSLGEFGAIIFIAGNQPFST 226
Query: 232 PTFSVLVWQWFNEPDLNLLPRAASGAVVLLLLASIVLVAI 271
++L++ E D +AA+ +LL+ + V++A+
Sbjct: 227 EITALLIFIRLEEYDY----QAAAAIASVLLITAFVMLAV 262
Score = 50.4 bits (119), Expect = 9e-11
Identities = 53/214 (24%), Positives = 92/214 (42%), Gaps = 28/214 (13%)
Query: 344 PNVLHNMETSVLLALGSGSLALLLGI----LAQEYRLHTQRAIPVYIIALPMLLPQLSLL 399
P + + +VL AL + ++ G+ + YR R + I+ LP LP + +
Sbjct: 54 PRAVASYRVTVLCALAATLFNVVFGVALAWVLTRYRFPGWRIVDA-IVDLPFALP--TAV 110
Query: 400 FGIQVLTLLMASQ-------------AYT-WWVVWAHTFFAFPLVYLALSGPWQSYNSNF 445
GI + TL + AYT ++ A F + P + + + +
Sbjct: 111 AGIALTTLFAGNGWFGSLLAPLGIKVAYTPVGIMVAMAFTSLPFIVRTVQPVLEDLDPAL 170
Query: 446 SKIARSLGKSEWQIFWKIKLPLLFPALLYAWAVGISVSLAQYLPTLMLGGGRLTTITTEA 505
+ A+SLG S+ ++F KI LPLL PALL ++ + SL ++ + + G + +TE
Sbjct: 171 EEAAQSLGGSDLEVFRKIILPLLTPALLAGLSLSFARSLGEFGAIIFIAGNQ--PFSTEI 228
Query: 506 VAL-----SSGYDRRVTAIYALCQALLPFVFFSI 534
AL YD + A A + FV ++
Sbjct: 229 TALLIFIRLEEYDYQAAAAIASVLLITAFVMLAV 262