Pairwise Alignments

Query, 566 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 272 a.a., spermidine/putrescine ABC transporter permease from Agrobacterium fabrum C58

 Score = 57.4 bits (137), Expect = 7e-13
 Identities = 63/250 (25%), Positives = 108/250 (43%), Gaps = 22/250 (8%)

Query: 296 PHKSILTLLFT--ISGAMIPLTLIWSLAQRWRFPDLFPTQWTGQFWYDEWPNVLHNMETS 353
           P  +IL L F     G   PL     ++  W F +LF  Q  G F          +   S
Sbjct: 27  PLSAILILAFQGPNGGLTFPLN---GVSLHW-FGNLFEQQAVGDFG--------GSFRRS 74

Query: 354 VLLALGSGSLALLLGILAQ-EYRLHTQRAIPVYIIALPMLL-PQLSLLFGIQVLTLLMAS 411
             L L   ++ + + +LA   +R     A P++ +++  L+ P + +  GI VL   +  
Sbjct: 75  FGLGLMVMTVTVFVSLLAGLAFRRKFIGATPLFYLSVASLVVPSIIISLGIGVLFQQLGL 134

Query: 412 QAYTWWV--VWAHTFFAFPLVYLALSGPWQSYNSNFSKIARSLGKSEWQIFWKIKLPLLF 469
           +  +W+     AH  +  P   L +   +  ++ ++ + AR LG S WQ F  + LP++ 
Sbjct: 135 EP-SWYTSAFGAHLTWTLPFGVLIMLAVFNRFSPSYEEAARDLGASSWQTFAHVVLPMIA 193

Query: 470 PALLYAWAVGISVSLAQYLPTLMLGGGRLTTITTEAVALSSGYDRRVTAIYALCQALLPF 529
           P+L+     G ++S  ++  TLM   G   T+  E   +++     V  +YAL      F
Sbjct: 194 PSLIGVGLFGFTLSYDEFARTLMT-SGTYNTLPLEIYGMTTNVTTPV--LYALGAVTTLF 250

Query: 530 VFFSIALLLG 539
               IA  LG
Sbjct: 251 SLLVIAATLG 260