Pairwise Alignments

Query, 382 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 348 a.a., ABC transporter, periplasmic spermidine putrescine-binding protein PotD (TC 3.A.1.11.1) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 46.2 bits (108), Expect = 1e-09
 Identities = 36/127 (28%), Positives = 60/127 (47%), Gaps = 16/127 (12%)

Query: 257 DGQLDLAITFNPNAVFSAQATGKLAPTAQSYAMKKGALTNIHFLAIPWNANAKEGALVAI 316
           +G+++L + +N +A  + QA   L    +    K+G +  +  LAIP NA  KEGAL  I
Sbjct: 220 EGEVNLGMVWNGSAFVARQAGTPL----EVVWPKEGGIFWMDSLAIPANAKNKEGALKLI 275

Query: 317 NFLLSDEAQSRKGDLSIWGDPSILKPQFLTGSAKNTILFPAIAEP---HPSWQSALEAEW 373
           NFLL  +      +   +  P++         A   +L P +A     +P  Q+  + EW
Sbjct: 276 NFLLRPDVAKEVAETIGYPTPNL---------AARKLLSPEVANDKSLYPDAQTISKGEW 326

Query: 374 QKRYGNS 380
           Q   G++
Sbjct: 327 QNDVGDA 333