Pairwise Alignments

Query, 382 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 389 a.a., ABC-type uncharacterized transport system, periplasmic component from Enterobacter asburiae PDN3

 Score =  336 bits (861), Expect = 8e-97
 Identities = 172/384 (44%), Positives = 237/384 (61%), Gaps = 9/384 (2%)

Query: 3   KMLTFLTTCALSFGV-SAQSWEETTEKARGQTVYFHAWGGSQEINSYLRWSADLLKSRYG 61
           +   FLT   L+  + +A+SW    ++A+GQTV+F+AWGG   +N YL W +  +++ Y 
Sbjct: 5   RFCAFLTGLLLAAPLCAAESWHAIQQQAKGQTVWFNAWGGDPAVNRYLEWVSGEMQTHYA 64

Query: 62  VTLQHVKVTDIAETTTRLIAEKAAGKNEQGSVDLVWINGENFKSMKNNQLLYGPFVEDLP 121
           +TL+ V + D A+   R+  E AAG+   GSVDL+W+NGENF+++K   LL   + + LP
Sbjct: 65  ITLKIVPLADAADAVKRIQTEAAAGRKTNGSVDLLWVNGENFRTLKEANLLQTGWAQTLP 124

Query: 122 NWPKVDKSLPVDSDFSEPTEGLEAPWGVGQLVFIHDKQQVNNPPASFAELLSYAQAFPNR 181
           NW  VD   PV  DF+ PT+G E+PWG  QL FI  K  +  PP     LL+YAQ  P +
Sbjct: 125 NWRYVDTRKPVTEDFAIPTDGAESPWGGAQLTFIARKASMPTPPVDPQALLAYAQQHPGK 184

Query: 182 ISYPQPPEFHGTSFLKAALIELTHYAPELNQAVEPATFEQLTQPLWQYLDELHAVAWRKG 241
           +SYP+PP+F GT+FL+  L+ LT   PE  Q    ATF+Q+T PLW YL++LH + WR+G
Sbjct: 185 VSYPRPPDFTGTAFLEQLLLTLTD-RPEALQKAPDATFDQVTAPLWAYLEKLHPLLWREG 243

Query: 242 KQFPAGSAQMMQLLDDGQLDLAITFNPNAVFSAQATGKLAPTAQSYAMKKGALTNIHFLA 301
           K FP   A+M  LL  G L+L++TFNP       A+G+L   + S+    G L N+HF+A
Sbjct: 244 KDFPPSPARMDALLAGGSLNLSLTFNPAHAQQKVASGELPADSYSFGFHSGMLGNVHFVA 303

Query: 302 IPWNANAKEGALVAINFLLSDEAQSRKGDLSIWGDPSILKPQFL-TGSAKNTI------L 354
           IP NA A  GA V  NFLLS +AQ RK D ++WGDPS+L  + L  G AK         L
Sbjct: 304 IPANAGASAGAKVVANFLLSPQAQIRKADPAVWGDPSVLDAKTLPEGDAKQLRAHTPQGL 363

Query: 355 FPAIAEPHPSWQSALEAEWQKRYG 378
              +AEP  +W +ALE EW +RYG
Sbjct: 364 PQVLAEPQSAWVNALEQEWLRRYG 387