Pairwise Alignments

Query, 382 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 377 a.a., extracellular solute-binding protein from Dickeya dadantii 3937

 Score = 69.3 bits (168), Expect = 2e-16
 Identities = 70/328 (21%), Positives = 138/328 (42%), Gaps = 25/328 (7%)

Query: 4   MLTFLTTCALSFGVSAQSWEETTEKAR--GQTVYFHAWGGSQEINSYLRWSADLLKSRYG 61
           +L  L   A +  +S+ SW+    +AR  GQ V+F+ +         LR      + +YG
Sbjct: 20  LLPLLRVQAQTPDLSSLSWQAVEAQARQEGQLVWFNWY-----YQDRLREEVKAFEKQYG 74

Query: 62  VTLQHVKVTDIAETTTRLIAEKAAGKNEQGSVDLVWINGENFKSMKNNQLLYGPFVEDLP 121
           + +  +   +   +  +L+AE+     EQG +D++ + G  F  +   +L +GP    LP
Sbjct: 75  IRVT-IPDGEAMASINKLLAEQ---HREQGDIDVISVGGSQFGLLNGPKLFWGPLKARLP 130

Query: 122 NWPKVDKSLPVDSDFSEPTEGLEAPWGVGQLVFIHDKQQVNNP--PASFAELLSYAQAFP 179
              K+   +         T+G    +   Q V  ++  +++    P S  +   +    P
Sbjct: 131 AGDKLSYQIE-----GVDTQGYAVAFWGNQTVIAYNSARIDTADLPHSLPQFEQFLVKNP 185

Query: 180 NRISYPQPPEFHGTSFLKAALIELTHYAPELNQAVEPATFEQLTQPLWQYLDELHAVAWR 239
              ++       G +F+++    L       +    PA  ++L  P W++ +      ++
Sbjct: 186 GEFTFNVENGGSGPAFIESVTRALVTDVNYRDGNAAPAVLQRLA-PSWRWFNR-----YK 239

Query: 240 KGKQFPAGSAQMMQLLDDGQLDLAITFNPNAVFSAQATGKLAPTAQSYAMKKGALTNIHF 299
                 A +A  +  L+ G+  LA ++  + V S Q  G+++P  + Y    G     + 
Sbjct: 240 SSMVISASNADSITRLNAGEFKLAASWE-DLVLSLQHKGEVSPDIKFYLPDFGMPGGGNV 298

Query: 300 LAIPWNANAKEGALVAINFLLSDEAQSR 327
           + IP NA  K  AL+ I++L   + Q R
Sbjct: 299 VGIPANAKHKAAALLFIHWLTQPDTQRR 326