Pairwise Alignments

Query, 382 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 388 a.a., putative ABC transporter periplasmic binding protein from Escherichia coli BL21

 Score =  343 bits (879), Expect = 6e-99
 Identities = 170/372 (45%), Positives = 229/372 (61%), Gaps = 7/372 (1%)

Query: 14  SFGVSAQSWEETTEKARGQTVYFHAWGGSQEINSYLRWSADLLKSRYGVTLQHVKVTDIA 73
           S    A  W+E   +A+GQTV+F+AWGG   IN YL W +  +K+ Y + L+ V++ D A
Sbjct: 15  SLATHASDWQEIKNEAKGQTVWFNAWGGDTAINRYLDWVSGEMKTHYAINLKIVRLADAA 74

Query: 74  ETTTRLIAEKAAGKNEQGSVDLVWINGENFKSMKNNQLLYGPFVEDLPNWPKVDKSLPVD 133
           +   R+  E AAG+   GSVDL+W+NGENF+++K   LL   + E LPNW  VD  LPV 
Sbjct: 75  DAVKRIQTEAAAGRKTGGSVDLLWVNGENFRTLKEANLLQTGWAETLPNWRYVDTQLPVR 134

Query: 134 SDFSEPTEGLEAPWGVGQLVFIHDKQQVNNPPASFAELLSYAQAFPNRISYPQPPEFHGT 193
            DFS PT+G E+PWG  QL FI  +     PP +   LL +A+A P  ++YP+PP+F GT
Sbjct: 135 EDFSVPTQGAESPWGGAQLTFIARRDVTPQPPQTPQALLEFAKANPGTVTYPRPPDFTGT 194

Query: 194 SFLKAALIELTHYAPELNQAVEPATFEQLTQPLWQYLDELHAVAWRKGKQFPAGSAQMMQ 253
           +FL+  LI LT     L +A + ATF ++T PLWQYLD LH   WR+GK FP   A+M  
Sbjct: 195 AFLEQLLIMLTPDPAALKEAPDDATFARVTAPLWQYLDVLHPYLWREGKDFPPSPARMDA 254

Query: 254 LLDDGQLDLAITFNPNAVFSAQATGKLAPTAQSYAMKKGALTNIHFLAIPWNANAKEGAL 313
           LL  G L L++TFNP       A+G L  ++ S+  ++G + N+HF+ IP NANA   A 
Sbjct: 255 LLKAGTLRLSLTFNPAHAQQKIASGDLPASSYSFGFREGMIGNVHFVTIPANANASAAAK 314

Query: 314 VAINFLLSDEAQSRKGDLSIWGDPSILKPQFLTGSAKNTI-------LFPAIAEPHPSWQ 366
           V  NFLLS +AQ RK D ++WGDPS+L PQ L    + ++       L P +AEPH  W 
Sbjct: 315 VVANFLLSPDAQLRKADPAVWGDPSVLDPQKLPDGQRESLQSRMPQDLPPVLAEPHAGWV 374

Query: 367 SALEAEWQKRYG 378
           +ALE EW  RYG
Sbjct: 375 NALEQEWLHRYG 386