Pairwise Alignments

Query, 365 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 372 a.a., ABC transporter permease from Rhodanobacter sp000427505 FW510-R12

 Score =  179 bits (455), Expect = 8e-50
 Identities = 117/368 (31%), Positives = 192/368 (52%), Gaps = 9/368 (2%)

Query: 3   SLFRIKAVLVKEFRQLSRDRITFGMVVMIPLIQLLLFGFAINTDVRNIPIGVVDQSDSSF 62
           S  R++A  VKE   + RD  +  +V + P++QLL+F FA   +VRN+ I V +Q    +
Sbjct: 7   SFTRLRAQFVKEVLSILRDPRSRMVVFVPPILQLLVFAFAATLEVRNVDIAVYNQDAGRW 66

Query: 63  SRLLVESVKVTQVIRVKQHYLTVNEAEKAIASGDIRAALILPSD---LVARSQQQRELGQ 119
           S  LV+ +     I   +H  +  +  + I  G++ AAL +P+D   ++A     R   Q
Sbjct: 67  SYELVQRLDSAHFITRVRHVDSERQLRQLIDRGEVIAALAIPADFSRVIAAGGSGR--AQ 124

Query: 120 WLIDG---SDTMIAGALLGLKNMPLTDLPTLGIQPLTPTFEITLLYNPSRRSAVNIVPGL 176
            L+DG   +   I  A L      +  L   G Q   P   +   +NP+      IVPGL
Sbjct: 125 VLVDGRRSNSGQITVAYLSTIAAEVGALVVPGAQAPNPVV-VRHWFNPNLVYRWFIVPGL 183

Query: 177 LGVILTMTMILFTSAAIVRERERGNLELLITTPVHSIELMIGKIVPYIFVGLIQVAIILG 236
            G++   + +L TS +I RERE G  + L+ +P  + E++I K +P + +G +    ++ 
Sbjct: 184 TGILALFSALLITSLSIARERELGTFDQLLVSPTSTPEIIISKSLPALAIGTLLGLFMIS 243

Query: 237 LGHFIFAVPINGALSQILFGTLLFISASLTLGLVISTIANTQLQAMQMTVFILLPSILLS 296
            G F+F +P  G+   +L   LLFI + + +GL+IS ++ TQ QA+     I +P++L+S
Sbjct: 244 AGVFLFGIPFTGSFGLLLASLLLFILSVVGIGLMISAVSATQQQAILGAFAIGVPAVLMS 303

Query: 297 GFMFPYEGMPTAAQWLSELLPATHFMRLIRGIVLRGADLADLWRDTLWLALFTLFGLMLA 356
           GF  P E MP A QW+++ +P THF+ ++ G  L+     D+  +   LA+  L  L LA
Sbjct: 304 GFATPVENMPVALQWMAQAIPLTHFLVIVEGTFLKTMPAMDVLANLWPLAVIALVTLTLA 363

Query: 357 ALRFKKSL 364
            L  +  L
Sbjct: 364 TLLVRSRL 371