Pairwise Alignments

Query, 365 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 389 a.a., ABC transporter permease from Rhodanobacter sp000427505 FW510-R12

 Score =  162 bits (410), Expect = 1e-44
 Identities = 99/345 (28%), Positives = 184/345 (53%), Gaps = 17/345 (4%)

Query: 4   LFRIKAVLVKEFRQLSRDRITFGMVVMIPLIQLLLFGFAINTDVRNIPIGVVDQSDSSFS 63
           L R+ A++ KE  Q  RD  T  +  ++P++ L LF +A++ D + + IGVV +S  + +
Sbjct: 23  LHRLMALVAKESHQALRDPSTLLIAFVLPVVLLFLFAYAVSLDAKEVRIGVVLESPGASA 82

Query: 64  RLLVESVKVTQVI--RVKQHYLTVNEAEKAIASGDIRAALILPSDLVARSQQQ--RELGQ 119
           + L  +   T+ +  RV Q      E    + SGD+R  +++P D   R  ++    L Q
Sbjct: 83  QSLAAAFTGTRFLDARVVQDR---REVADQLVSGDLRGYVVIPQDFEQRLARRGSEPLVQ 139

Query: 120 WLIDGSDTMIAGALLGLKNMPLTDLPTLGIQPLTPTFEITL----LYNPSRRSAVNIVPG 175
            + DGS    A  +       +      G+   +P   + L     +NP   S   ++PG
Sbjct: 140 IITDGSYPNTANYVENYAR-GVVQTWRAGLGAASPVQAVVLEPRYWFNPELESRRALIPG 198

Query: 176 LLGVILTMTMILFTSAAIVRERERGNLELLITTPVHSIELMIGKIVPYIFVGLIQVAIIL 235
            + +++T+   + T+  + RE ERG +E +++TP    E++IGK++PY  +G++      
Sbjct: 199 AIAIVMTIIGTMLTALVVAREWERGTMEAVLSTPASVAEILIGKLLPYFVLGMLSTLGAA 258

Query: 236 GLGHFIFAVPINGALSQILFGTLLFISASLTLGLVISTIANTQLQAMQMTVFI-LLPSIL 294
            L  F+F VP++G+L+ +L  + +F+  +L  GL+IS++A  Q  A Q+ +F   LP+ +
Sbjct: 259 ALAVFVFGVPLHGSLAALLLLSAVFMVPALGQGLLISSLARNQFLAAQIALFTGFLPAFM 318

Query: 295 LSGFMFPYEGMPTAAQWLSELLPATHFMRLIRGIVLRGADLADLW 339
           LSGF++  + MP   + ++ L+PA +F+  ++ + L G    D+W
Sbjct: 319 LSGFLYEIDAMPAPIRAITRLIPARYFVESLKTVFLAG----DIW 359