Pairwise Alignments

Query, 365 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 911 a.a., ribosome-associated ATPase/putative transporter RbbA from Rhodanobacter sp000427505 FW510-R12

 Score =  141 bits (356), Expect = 6e-38
 Identities = 92/370 (24%), Positives = 184/370 (49%), Gaps = 14/370 (3%)

Query: 3   SLFRIKAVLVKEFRQLSRDRITFGMVVMIPLIQLLLFGFAINTDVRNIPIGVVDQSDSSF 62
           SL R+ +  ++E  +L RD I   + V+  L+ +L+ G+ I  DV N+   V+D   +S 
Sbjct: 539 SLRRLFSFTLRESLELRRDPIRLTLAVLGSLLLMLVLGYGITLDVENLSYAVLDHDQTSI 598

Query: 63  SRLLVESVKVTQVIRVKQHYLTVNEAEKAIASGDIRAALILPSDLVARSQQQR--ELGQW 120
           SR    ++  ++  +      +  + ++ + +G+I  A+ +P        + R  ++G W
Sbjct: 599 SRDYSLNLSGSRYFKEHAPLSSYADLDRRMRAGEISLAIEIPPGFGRDLLRGRPVQVGAW 658

Query: 121 LIDGSDTM---IAGALLGLKNMPLTD-----LPTLGIQPLTPTFEITLLYNPSRRSAVNI 172
           +     T    + G + G+    ++      L    + PL  T E    YNP  RS   +
Sbjct: 659 IDGAMPTRAETVRGYVQGIHQYWVSQRMREALGEAAVAPLA-TVETRFRYNPDVRSLPAM 717

Query: 173 VPGLLGVILTMTMILFTSAAIVRERERGNLELLITTPVHSIELMIGKIVPYIFVGLIQVA 232
           VP ++ ++L +   +  + ++VRE+E G++     TP   +E ++GK +PY+ + ++   
Sbjct: 718 VPAVIPLLLMLIPAILAALSVVREKEMGSIINFYVTPSTRLEFLLGKQIPYVVLAMVSFL 777

Query: 233 IILGLGHFIFAVPINGALSQILFGTLLFISASLTLGLVISTIANTQLQAMQMT-VFILLP 291
           +++ +   +F VP+ G+ + +  G LL++ ++  LGL+IST   +Q+ A+  T +  +LP
Sbjct: 778 LLVLMAVVLFHVPVTGSFAALALGALLYVLSATALGLLISTFVRSQVAALFGTSLLTILP 837

Query: 292 SILLSGFMFPYEGMPTAAQWLSELLPATHFMRLIRGIVLRGADLADLWRD--TLWLALFT 349
           ++  SG + P   +  A + +  + P THF+ + RG   +  +  DL      L +++  
Sbjct: 838 AVQFSGLIDPVSSLEGAGRLIGNVFPTTHFVTISRGTFSKALEFHDLRASFVPLLISIPV 897

Query: 350 LFGLMLAALR 359
           L GL    LR
Sbjct: 898 LIGLAAVLLR 907