Pairwise Alignments

Query, 365 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 387 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score = 88.2 bits (217), Expect = 3e-22
 Identities = 74/340 (21%), Positives = 147/340 (43%), Gaps = 25/340 (7%)

Query: 6   RIKAVLVKEFRQLSRDRITFGMVVMIPLIQLLLFGFAINTDV-RNIPIGVVDQSDSSFSR 64
           ++K  + +++  L  D+  F  +  +P++  +   +  +  + R++P GVVD S S  SR
Sbjct: 5   KMKHAIPRQWTLLRHDKWLFSCLTWVPILLAVSIWWIFSQGIARDLPFGVVDFSHSQLSR 64

Query: 65  LLVESVKVTQVIRVKQHYLTVNEAEKAIASGDIRAALILPSDLVARSQQQRELGQWLIDG 124
            L+  V  T  + V QH+ +V+EA +A+ S  I   +++P+       +Q +        
Sbjct: 65  QLIREVDATSTLLVSQHFASVDEASQAMRSNQIYGFMVIPAQFDKAIYRQEQPQVTTFYN 124

Query: 125 SDTMIAGALLG----------------LKNMPL---TDLPTLGIQPLTPTFEITLLYNPS 165
           S  ++ G L+                 +KN+     T L  +G + +    +IT L+N +
Sbjct: 125 SQMILVGKLVNSAVVQAQGTFNAQVDVMKNLATKTHTTLAAMG-RSVPVRTQITPLFNQN 183

Query: 166 RRSAVNIVPGLLGVILTMTMILFTSAAIVRE-RERGNLELLITTPVHSIELMIGKIVPYI 224
              A  +V  ++  +  +T+++ T   +    R  G    L  +P   +  +   ++PY+
Sbjct: 184 TNYAQFLVSAIVPALWQITIVVSTILILAANYRHYGLKSWLAQSP---LTQLTRTLLPYL 240

Query: 225 FVGLIQVAIILGLGHFIFAVPINGALSQILFGTLLFISASLTLGLVISTIANTQLQAMQM 284
            + ++Q    L   + +   P+ G  S +L    + + A + +G     +     +AM  
Sbjct: 241 PIFMLQGLGFLIWFYDVLRWPMFGHFSTLLLAQSITVVACVIMGAFFYFLTLDPARAMSF 300

Query: 285 TVFILLPSILLSGFMFPYEGMPTAAQWLSELLPATHFMRL 324
                 PS    G  FP   M T AQ    LLP +H++ +
Sbjct: 301 AGAFTAPSFAFMGITFPASDMNTLAQAWRNLLPISHYIEV 340