Pairwise Alignments

Query, 365 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 929 a.a., Ribosome-associated ATPase RbbA from Sphingobium sp. HT1-2

 Score =  127 bits (318), Expect = 2e-33
 Identities = 96/360 (26%), Positives = 169/360 (46%), Gaps = 18/360 (5%)

Query: 13  KEFRQLSRDRITFGMVVMIPLIQLLLFGFAINTDVRNIPIGVVDQSDSSFSRLLVESVKV 72
           +E  +L RDRI     ++ P+I L +  ++I+ DV+NI + V+D   S+ SR L    + 
Sbjct: 567 REATELMRDRIRLAFALIGPIILLCIAAYSISFDVQNIRLAVLDHDRSAASRDLQLYFEG 626

Query: 73  TQVIRVKQHYLTVNEAEKAIASGDIRAALILPS----DLVARSQQQRELGQWLIDGSDTM 128
           ++  RV+    +   A++A+     +  L +P     DL A  +   ++    IDG+   
Sbjct: 627 SRYFRVEPELASDAAADQALREASTKMVLDIPPGFGRDLTAGRRPAVDVR---IDGASPF 683

Query: 129 IAG--------ALLGLKNMPLTDLPTLGIQPLTPTFEITLLYNPSRRSAVNIVPGLLGVI 180
            A          LL      L       +  L+ T E   +YN   RS   + PG+L + 
Sbjct: 684 PASNARAYAEAVLLRYAMDQLRSAQPFAVPDLSSTIEPRFIYNQEFRSIYAMAPGVLMLC 743

Query: 181 LTMTMILFTSAAIVRERERGNLELLITTPVHSIELMIGKIVPYIFVGLIQVAIILGLGHF 240
           + +   + T+  +VRE+E G++  L  +P      ++GK +PY  + +I    ++ +  F
Sbjct: 744 MILIPAMLTALGVVREKEIGSITNLYASPASLGAFLVGKQMPYALLAMISFVTLILVTVF 803

Query: 241 IFAVPINGALSQILFGTLLFISASLTLGLVISTIANTQLQAMQMTVFI-LLPSILLSGFM 299
           I  VP+ G+L  +L G  LFI +   LGL+IS    +Q+ A+  T  I L+PS+  SG +
Sbjct: 804 ILGVPLKGSLPALLIGGFLFILSVTGLGLMISAFVRSQVAAIFATSLICLIPSVNFSGLL 863

Query: 300 FPYEGMPTAAQWLSELLPATHFMRLIRGIVLRGADLADLWRDTLWLALFTLFGLMLAALR 359
           +P   +   +  +    P++ F  +  G   +G  +A   +   +LAL  L  L +   R
Sbjct: 864 YPVSTLTGPSHIIGLTFPSSWFQIVSLGTFTKGLGMASFGQ--AYLALMALAFLFVGGAR 921