Pairwise Alignments

Query, 365 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 375 a.a., Inner membrane transport permease YhhJ from Sphingobium sp. HT1-2

 Score = 96.7 bits (239), Expect = 9e-25
 Identities = 81/365 (22%), Positives = 162/365 (44%), Gaps = 20/365 (5%)

Query: 13  KEFRQLSRDRITFGMVVMIPLIQLLLFGFAINTDVRNIPIGVVDQSDSSFSRLLVESVKV 72
           KE R + +D     +++    + + L    +  +V N  + ++D+  S  SR L ++++ 
Sbjct: 14  KELRSVMKDVTLMALILFAFTVAIQLVANGVRAEVMNASVAIMDEDHSELSRRLRDAIQ- 72

Query: 73  TQVIRVKQHYLTVNEAEK-----AIASGDIRAALILPSDLVARSQQQRELGQWLIDGSDT 127
                 + ++    + E+     A+ SG     + +P    A +   R     ++  +  
Sbjct: 73  ------QPYFKPPEDIERSAIGPAMNSGKYIFVIEIPPRFEADTLAGRSPSVQILVDATA 126

Query: 128 MIAGALLGLKNMPLTDLPTLG-------IQPLTPTFEITLLYNPSRRSAVNIVPGLLGVI 180
           M    L       +    TL        ++ L    E  + +NP+ +SA       +   
Sbjct: 127 MTQAGLGAAYFQQIFAQETLDFLHARGLLEALPVQVESRMHFNPNAQSAWYTSVMQIVTN 186

Query: 181 LTMTMILFTSAAIVRERERGNLELLITTPVHSIELMIGKIVPY-IFVGLIQVAIILGLGH 239
           +T+  I+   AA++RERE   +E L+  PV + E+   KI+   + + L  +A +  + H
Sbjct: 187 VTVLSIILVGAAVIREREHSTIEHLLVMPVRASEIAFAKILANGLVILLASIASLWFVVH 246

Query: 240 FIFAVPINGALSQILFGTLLFISASLTLGLVISTIANTQLQAMQMTVFILLPSILLSGFM 299
            +  VP+ G+L        L++ +  +LG+ ++T+A +  Q     V +   + LLSG  
Sbjct: 247 GVLGVPLTGSLLLFTAAMFLYLFSVTSLGMWMATLAPSMPQFGLFAVPVYAIAYLLSGAA 306

Query: 300 FPYEGMPTAAQWLSELLPATHFMRLIRGIVLRGADLADLWRDTLWLALFTLFGLMLAALR 359
            P E MP+A + ++  LP T F+ L + I+ RGA +  +  +   +    +F + +A  R
Sbjct: 307 TPLESMPSAIRTIALCLPTTQFVSLSQAILYRGAGVRTILPELAIICGSGVFFVAMAVSR 366

Query: 360 FKKSL 364
           F+  L
Sbjct: 367 FRSML 371