Pairwise Alignments

Query, 365 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 916 a.a., Ribosome-associated ATPase RbbA from Sphingobium sp. HT1-2

 Score =  125 bits (315), Expect = 4e-33
 Identities = 86/361 (23%), Positives = 174/361 (48%), Gaps = 14/361 (3%)

Query: 13  KEFRQLSRDRITFGMVVMIPLIQLLLFGFAINTDVRNIPIGVVDQSDSSFSRLLVESVKV 72
           +E  +L RD +   + ++  LI +L+ GF + TD+  +   V+D+ +S  S+     +  
Sbjct: 556 RETLELQRDPVRATLALIGSLILMLVIGFGMTTDINELNYAVLDRDNSILSQNYALDISG 615

Query: 73  TQVIRVKQHYLTVNEAEKAIASGDIRAALILPS----DLVARSQQQRELGQWLIDGSDTM 128
           +            ++ ++ +  G++   + +P     D+ A   +Q  +G W  DG++  
Sbjct: 616 SSYFVEHAPIRDYDDLDRRMKDGELALVIEIPPGFGRDIAAG--RQVTVGAWF-DGANPQ 672

Query: 129 ----IAGALLGLKNMPLTDLPTLGIQPLTPTFEIT--LLYNPSRRSAVNIVPGLLGVILT 182
               + G + GL    L+         +  +F I     YNP  +S   +VP ++ ++L 
Sbjct: 673 RAETVQGYIQGLHQHWLSQQAAARGSAVGSSFSIENRYRYNPDVQSLPAMVPIVIPLLLL 732

Query: 183 MTMILFTSAAIVRERERGNLELLITTPVHSIELMIGKIVPYIFVGLIQVAIILGLGHFIF 242
           M   + T+ A+VRE+E G++  L  TPV   E ++GK +PY+ + L+   +++ +  FIF
Sbjct: 733 MLPAMLTALAVVREKEIGSIINLYVTPVSRSEFLLGKQLPYVVLALVNFLLMVLMAIFIF 792

Query: 243 AVPINGALSQILFGTLLFISASLTLGLVISTIANTQLQAMQMTVF-ILLPSILLSGFMFP 301
            VP+ G+   +L    ++   +  +GL+ S +  +Q+ AM + +   ++P+    G   P
Sbjct: 793 GVPVKGSFPTLLLAAAIYCVTATGMGLLASAVTRSQIAAMFLAMIGTMIPATTYGGMTDP 852

Query: 302 YEGMPTAAQWLSELLPATHFMRLIRGIVLRGADLADLWRDTLWLALFTLFGLMLAALRFK 361
              M  +A+ + ++ PA+H   + RG+  +    +DL    L LA+     + +A +  K
Sbjct: 853 VSSMEGSARIIGDIYPASHMFTISRGVFAKALGFSDLAGSFLPLAISAPLIVGIAIMLLK 912

Query: 362 K 362
           K
Sbjct: 913 K 913