Pairwise Alignments

Query, 365 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 370 a.a., putative translation related protein from Pseudomonas putida KT2440

 Score =  119 bits (299), Expect = 1e-31
 Identities = 94/363 (25%), Positives = 167/363 (46%), Gaps = 16/363 (4%)

Query: 12  VKEFRQLSRDRITFGMVVMIPLIQLLLFGFAINTDVRNIPIGVVDQSDSSFSRLLVESVK 71
           +KE   L  D +    ++    + + +        V N  + VVD+  S  SR L E+++
Sbjct: 12  LKELTSLRHDSVLLLFLLYAFSVAIYMPAAGSVIGVHNASVAVVDEDHSLLSRKLSEALQ 71

Query: 72  VTQVIRVKQHYLTVNEAEKAIASGDIRAALILP----SDLVARSQQQRELGQWLIDGSDT 127
             +        L     ++A+ SG     + +P    SDL+A    + ++       S  
Sbjct: 72  PPEFQPAVP--LPPQRLDQAMDSGQYTFVINVPVNFQSDLLAGRSPELQINVDATAMSQA 129

Query: 128 MIAGALLG-LKNMPLTDLPTLGIQPLTPTFEITLLYNPSRRSAVNIVPGLLGVILTMTMI 186
            +    +G +    L D    G +          L+NP+      +    +   +T+  I
Sbjct: 130 FMGAGYIGRIFERELLDYSQRGNEQSPVLINPKALFNPNLEGGWFLAVIQIVNNITILAI 189

Query: 187 LFTSAAIVRERERGNLELLITTPVHSIELMIGKI-----VPYIFVGLIQVAIILGLGHFI 241
           + T  A++RERE G L+ L+  P+ ++E+M+ KI     V  I   +  V ++ G     
Sbjct: 190 ILTGTALLREREHGTLDHLLVLPLTALEIMLAKIGSNALVVVICTWISLVVVVKGA---- 245

Query: 242 FAVPINGALSQILFGTLLFISASLTLGLVISTIANTQLQAMQMTVFILLPSILLSGFMFP 301
             VP++G++   L  T L++ AS +LG+ ++T+A +  Q   + + +++P +LLSG   P
Sbjct: 246 LGVPLSGSMGLFLAVTALYLFASTSLGIFLATLARSTPQFGLLAIPVIIPMLLLSGGSTP 305

Query: 302 YEGMPTAAQWLSELLPATHFMRLIRGIVLRGADLADLWRDTLWLALFTLFGLMLAALRFK 361
            + MP   QW+ +  P+THF+ L   I+ R A  A +W D L L L  L    +A  RF+
Sbjct: 306 LDSMPQWLQWVMQGSPSTHFVSLSAAILFRDAGWAVVWPDILALTLIGLVFFSVALARFR 365

Query: 362 KSL 364
           +SL
Sbjct: 366 RSL 368