Pairwise Alignments

Query, 365 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 380 a.a., ABC transporter permease from Magnetospirillum magneticum AMB-1

 Score =  291 bits (745), Expect = 2e-83
 Identities = 158/370 (42%), Positives = 236/370 (63%), Gaps = 10/370 (2%)

Query: 6   RIKAVLVKEFRQLSRDRITFGMVVMIPLIQLLLFGFAINTDVRNIPIGVVDQSDSSFSRL 65
           R+ AV++KE  Q+ RDR+TF M+V++PL+QL+LFG+AIN+D + +P  V  Q D  F+R 
Sbjct: 11  RLMAVMIKEVIQMRRDRLTFAMMVLVPLLQLVLFGYAINSDPKGLPTLVQVQEDGPFARA 70

Query: 66  LVESVKVTQVIRVKQHYLTVNEAEKAIASGDIRAALILPSDLVARSQQQRELGQWL-IDG 124
           LV  ++ +   R+     T  EAE+ +A+GD +  + +P    A   +       L  D 
Sbjct: 71  LVAGLRNSSYFRMVGEVRTEAEAERHLATGDAQFVVTVPLGFEAALVRGERPALLLEADA 130

Query: 125 SD-------TMIAGALLG-LKNMPLTD-LPTLGIQPLTPTFEITLLYNPSRRSAVNIVPG 175
           +D          AGAL+  + +  LT  L +L  +P      +   YNP   S  NIVPG
Sbjct: 131 TDPAAASNAVAAAGALMRTVFDAELTGPLSSLRGRPDPVDLRVHRRYNPEGISQYNIVPG 190

Query: 176 LLGVILTMTMILFTSAAIVRERERGNLELLITTPVHSIELMIGKIVPYIFVGLIQVAIIL 235
           L+GVILTMTM++ T+ A+ RERERG +E L+  PV  +E+M+GKI+PYI VG +QV +I+
Sbjct: 191 LMGVILTMTMVMMTALAVTRERERGTMENLLAMPVRPLEVMVGKILPYIGVGYVQVVVIV 250

Query: 236 GLGHFIFAVPINGALSQILFGTLLFISASLTLGLVISTIANTQLQAMQMTVFILLPSILL 295
             G ++F VP+ G+L+ +    LLFI+++LT+G   ST+A  QLQAMQM+ F  LPSILL
Sbjct: 251 ASGRWLFGVPLMGSLTLLSVALLLFIASNLTVGFTFSTVAKNQLQAMQMSFFFFLPSILL 310

Query: 296 SGFMFPYEGMPTAAQWLSELLPATHFMRLIRGIVLRGADLADLWRDTLWLALFTLFGLML 355
           SGFMFP+ GMP  AQW+ E+ P THF+R++RGI+L+G  +A++W +   +  F L   +L
Sbjct: 311 SGFMFPFRGMPVWAQWVGEIFPLTHFLRVVRGILLKGNGMAEIWPEMWPIIAFVLASALL 370

Query: 356 AALRFKKSLD 365
           A  +++++LD
Sbjct: 371 AMKQYRQTLD 380