Pairwise Alignments

Query, 365 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 384 a.a., ABC transporter permease from Serratia liquefaciens MT49

 Score =  160 bits (404), Expect = 7e-44
 Identities = 107/374 (28%), Positives = 200/374 (53%), Gaps = 14/374 (3%)

Query: 3   SLFRIKAVLVKEFRQLSRDRITFGMVVMIPLIQLLLFGFAINTDVRNIPIGVVDQSDSSF 62
           SL R++A+ +KE RQ+ RD  +  +  +IPL+ L +FG+ IN D   + +G++ +  S  
Sbjct: 14  SLRRLRALCLKETRQIMRDPSSGLIAFVIPLMLLFIFGYGINLDSSKLRLGILMEQQSEE 73

Query: 63  SRLLVESVKVTQVIRVKQHYLTVNEAE--KAIASGDIRAALILPSDLVARSQQQRELG-- 118
           +R L  +   +  I   +  ++ N  +  + + +G IR  +++P+D   R  +  +    
Sbjct: 74  ARDLANAFTGSPYI---EPTISDNRQQLIQLMQAGRIRGLVVIPNDFAQRMARPHDSAPL 130

Query: 119 QWLIDGSD----TMIAGALLGLKNMPLTDLPTLGIQPLTPTFEITLLY--NPSRRSAVNI 172
           Q + DGS+      + G   G+  +      T   +   P  ++ + Y  NP+  S   I
Sbjct: 131 QIITDGSEPNTANFVQGYTQGVWQIWQQQRATDSGREEKPLIDVQMRYWFNPAAISRHYI 190

Query: 173 VPGLLGVILTMTMILFTSAAIVRERERGNLELLITTPVHSIELMIGKIVPYIFVGLIQVA 232
           +PG + +I+T+   + TS  I RE ERG +E L++T V   EL++ K+VPY F+G+I + 
Sbjct: 191 IPGAITIIMTVIGAILTSLVIAREWERGTMEALLSTQVTRTELLLSKLVPYYFLGMIAMV 250

Query: 233 IILGLGHFIFAVPINGALSQILFGTLLFISASLTLGLVISTIANTQLQAMQMTV-FILLP 291
           + + +  ++  VP  G+L  +   + LF++++L +GL+ISTI   Q  A  + +    LP
Sbjct: 251 LCMVVSVWVLGVPYRGSLLILFVISSLFLASTLGMGLLISTITRNQFNAAMVALNAAFLP 310

Query: 292 SILLSGFMFPYEGMPTAAQWLSELLPATHFMRLIRGIVLRGADLADLWRDTLWLALFTLF 351
           SI+LSGF+F  + MP   + ++ ++PA +F+  ++ + L G     L  + L+L    + 
Sbjct: 311 SIMLSGFIFQIDSMPAIVRAVTYIIPARYFVSTLQTLFLAGNVGTVLMINLLFLIASAVV 370

Query: 352 GLMLAALRFKKSLD 365
            + L A + ++ LD
Sbjct: 371 FIGLTAWKTQRRLD 384