Pairwise Alignments

Query, 365 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 374 a.a., FIG01045128: hypothetical protein from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  124 bits (312), Expect = 3e-33
 Identities = 102/383 (26%), Positives = 179/383 (46%), Gaps = 32/383 (8%)

Query: 1   MNSLFRIKAVLVKEFRQLSRDRITFGMVVMIPLIQLLLFGFAINTDVRNIPIGVVDQSDS 60
           M  L  I  + VKE R L  D+    ++V    I +      +   +   PI + D   S
Sbjct: 1   MRGLRNIYNLGVKELRSLLGDKAMLALIVFAFTISVYSSATVLPGSLHLAPIAIADMDQS 60

Query: 61  SFSRLLVESVKVTQVIRVKQHYLTVNEAEKAIASGDIRAALILPS----DLVARSQQQRE 116
             S  +V S      +  +   +T  E +  + +G    A+ +P     D++A  Q   +
Sbjct: 61  QLSNRIVNSFYRPWFLPPEM--ITATEMDAGLDAGRYTFAVNIPPNFQRDVLAGRQPDIQ 118

Query: 117 LGQWLIDGS--------DTMIAGALLGLKNMPLTDLPTLGIQPLTPTFEITLLYNPSRRS 168
           +    +D +        ++ I   + G  N  +       +QP++   EI + +NP+   
Sbjct: 119 VN---VDATRMSQAFTGNSYIQNIISGEVNSFVARARGDNVQPVS--LEIRMRFNPNLDP 173

Query: 169 AVNIVPGLLGVI--LTMTMILFTSAAIVRERERGNLELLITTPVHSIELMIGKI-----V 221
           A     G++ +I  +TM  I+ T +A++RERE G +E L+  PV   E+M+ K+     V
Sbjct: 174 AW--FGGVMAIINNITMLAIVLTGSALIREREHGTVEHLLVMPVTPFEIMMAKVWSMGLV 231

Query: 222 PYIFVGLIQVAIILGLGHFIFAVPINGALSQILFGTLLFISASLTLGLVISTIANTQLQA 281
             +  GL  + ++ G    +  VPI G++   + G  L + A+ ++G+ + TIA +  Q 
Sbjct: 232 VLVVSGLSLMLMVKG----VLGVPIEGSIPLFMLGVALSLFATTSIGIFMGTIARSMPQL 287

Query: 282 MQMTVFILLPSILLSGFMFPYEGMPTAAQWLSELLPATHFMRLIRGIVLRGADLADLWRD 341
             + + +LLP  +LSG   P E MP A Q +   +P THF+ L + I+ RGA L+ +W  
Sbjct: 288 GLLMILVLLPLQMLSGGSTPRESMPQAVQDIMLTMPTTHFVSLAQAILYRGAGLSIVWPQ 347

Query: 342 TLWLALFTLFGLMLAALRFKKSL 364
            L L        ++A LRF+K++
Sbjct: 348 FLTLLAIGGVFFLIALLRFRKTI 370