Pairwise Alignments

Query, 365 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 377 a.a., ABC-type multidrug transport system, permease component from Enterobacter asburiae PDN3

 Score =  166 bits (421), Expect = 7e-46
 Identities = 112/374 (29%), Positives = 197/374 (52%), Gaps = 20/374 (5%)

Query: 6   RIKAVLVKEFRQLSRDRITFGMVVMIPLIQLLLFGFAINTDVRNIPIGVVDQSDSS---- 61
           R++A+ VKE RQ+ RD  ++ + V+IPL+ L +FG+ IN D   + +G++ +  S     
Sbjct: 10  RVRALCVKETRQIVRDPSSWLIAVVIPLLLLFIFGYGINLDSSKLRVGILLEQQSEEALD 69

Query: 62  FSRLLVESVKVTQVIRVKQHYLTVNEAEKAIASGDIRAALILPSDLVARSQQQRELG--Q 119
           F+  +  S  +   I   +  L      + + +G IR  +++P D  A   +       Q
Sbjct: 70  FTHAMTGSPYIDATISDSRQELI-----QKMQAGKIRGLIVIPVDFAANMARANTDAPIQ 124

Query: 120 WLIDGSDTMIAGALLG-------LKNMPLTDLPTLGIQPLTPTFEITLLYNPSRRSAVNI 172
            + DGS+   A  + G       L  M   +      +PL    +    +NP+  S   I
Sbjct: 125 VITDGSEPNTANFVQGYAEGIWQLWQMQRAEDRGEEFKPLIDV-QTRYWFNPAAISQHFI 183

Query: 173 VPGLLGVILTMTMILFTSAAIVRERERGNLELLITTPVHSIELMIGKIVPYIFVGLIQVA 232
           +PG + +I+T+   + TS  I RE ERG +E L++T V  +EL++ K++PY F+G++ + 
Sbjct: 184 IPGAVTIIMTVIGAILTSLVIAREWERGTMEALLSTEVTRVELLLCKLIPYYFLGMLAML 243

Query: 233 IILGLGHFIFAVPINGALSQILFGTLLFISASLTLGLVISTIANTQLQAMQMTV-FILLP 291
           + + +  FI  VP  G+L  + F T LF+ ++L +GL+ISTI   Q  A Q+ +    LP
Sbjct: 244 LCMLVSVFILGVPYRGSLVVLFFITSLFLLSTLGMGLLISTITRNQFNAAQVALNAAFLP 303

Query: 292 SILLSGFMFPYEGMPTAAQWLSELLPATHFMRLIRGIVLRGADLADLWRDTLWLALFTLF 351
           SI+LSGF+F  + MP   + ++ ++PA +F+  ++ + L G     L  +TL+L    + 
Sbjct: 304 SIMLSGFIFQIDSMPAVIRAVTYVIPARYFVSTLQSLFLAGNIPVVLIVNTLFLMASAVM 363

Query: 352 GLMLAALRFKKSLD 365
            + L  ++ K+ LD
Sbjct: 364 FIGLTWMKTKRRLD 377