Pairwise Alignments

Query, 365 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 381 a.a., ABC transporter permease from Dickeya dianthicola ME23

 Score =  158 bits (400), Expect = 2e-43
 Identities = 114/372 (30%), Positives = 195/372 (52%), Gaps = 16/372 (4%)

Query: 6   RIKAVLVKEFRQLSRDRITFGMVVMIPLIQLLLFGFAINTDVRNIPIGVVDQSDSSFSRL 65
           R++A+ +KE RQ+ RD  +  +  +IPL+ L +FG+ IN D   + +GV+ +  S+ +  
Sbjct: 14  RLRALCLKETRQILRDPSSALIAFVIPLLLLFIFGYGINLDSSRLNVGVLVEQRSAEADS 73

Query: 66  LVESVKVTQVIRVKQHYLTVNEAE--KAIASGDIRAALILPSDLVAR--SQQQRELGQWL 121
           L  +   +  + V    L+ N     K + +G IR  L++P+D   R    Q R   Q +
Sbjct: 74  LARAFTGSPYLAVT---LSDNRPALIKRMQAGQIRGLLVIPADFAKRLAHPQDRAPIQVI 130

Query: 122 IDGSDTMIAGALLGLKNMPLTDLPTLGIQP----LTPTFEITLLY--NPSRRSAVNIVPG 175
            DGS+   A  + G              Q       P  E+   Y  N +  S   I+PG
Sbjct: 131 TDGSEPNTAQFVQGYAQGVWQRWQQQYAQDHGGRYQPLIEVQTRYWFNAAAISRHFIIPG 190

Query: 176 LLGVILTMTMILFTSAAIVRERERGNLELLITTPVHSIELMIGKIVPYIFVGLIQVAIIL 235
            + +I+T+   + TS  I RE ERG +E L++T V   EL+  K++PY  +G+I +A+ +
Sbjct: 191 AITIIMTVIGAILTSLVIAREWERGTMEALLSTQVTRTELLFAKLLPYYVLGMIAMALCV 250

Query: 236 GLGHFIFAVPINGALSQILFG-TLLFISASLTLGLVISTIANTQLQAMQMTV-FILLPSI 293
            +  F+  VP  G+L  +LFG + LF++++L +GL+IST+   Q  A  + +    LP++
Sbjct: 251 AVAVFVLGVPYRGSL-WLLFGISSLFLASTLGMGLLISTLTRNQFNAAMVALNAAFLPAV 309

Query: 294 LLSGFMFPYEGMPTAAQWLSELLPATHFMRLIRGIVLRGADLADLWRDTLWLALFTLFGL 353
           +LSGF+F    MP   Q +S L+PA +F+  ++ + L G   + L  + L+L    +F +
Sbjct: 310 MLSGFIFEIHSMPMLVQAVSYLIPARYFVSTLQTLFLAGNISSVLLMNLLFLMTSAVFFI 369

Query: 354 MLAALRFKKSLD 365
            L A + ++ LD
Sbjct: 370 GLTAWKTRRRLD 381