Pairwise Alignments

Query, 365 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 910 a.a., putative ABC transporter ATP-binding protein YbhF from Alteromonas macleodii MIT1002

 Score =  140 bits (354), Expect = 1e-37
 Identities = 99/369 (26%), Positives = 185/369 (50%), Gaps = 11/369 (2%)

Query: 4   LFRIKAVLVKEFRQLSRDRITFGMVVMIPLIQLLLFGFAINTDVRNIPIGVVDQSDSSFS 63
           L R+ +   +E  +L RD I   M  +  ++ +++ G+ I  DV ++   V D+  +S S
Sbjct: 540 LRRLLSYASRETLELIRDPIRLTMSFLGSMVLMVVIGYGITMDVDDLSYAVFDRDQTSTS 599

Query: 64  RLLVESVKVTQVIRVKQHYLTVNEAEKAIASGDIRAALILPSDLVARSQ--QQRELGQWL 121
                ++  ++    +    +  + ++ + SG++  A+ +P +   +    +Q E+G W 
Sbjct: 600 LNYRNALSGSRYFNEQPVITSYADMDRRMKSGELSLAVEIPPEFSQKLHKGEQVEIGAW- 658

Query: 122 IDGS----DTMIAGALLGLKNMPLTDLPTLGIQPLTPT---FEITLLYNPSRRSAVNIVP 174
           IDG+       I G + G+    L    +   Q  + +    E   LYNP  RS V IVP
Sbjct: 659 IDGAMPSRAETIQGYVTGIHLKWLLQQASQASQVQSTSSINVESRYLYNPDVRSLVAIVP 718

Query: 175 GLLGVILTMTMILFTSAAIVRERERGNLELLITTPVHSIELMIGKIVPYIFVGLIQVAII 234
            ++ ++L M   L TS A+VRE+E G++  L  TPV  IE ++GK +PYI    +   ++
Sbjct: 719 AVMPMLLLMIPALLTSLAVVREKELGSIINLYVTPVTRIEFLLGKQLPYIATSFVSFLLL 778

Query: 235 LGLGHFIFAVPINGALSQILFGTLLFISASLTLGLVISTIANTQLQAMQM-TVFILLPSI 293
           + +  ++F +P+ G +  +   TLLF++ S + GL+ S   N+Q+ A+ + T+  ++P+I
Sbjct: 779 VAMAVWLFNIPLKGDVIVLCLITLLFVTFSTSFGLLASVFTNSQIAAILLTTIGTMVPAI 838

Query: 294 LLSGFMFPYEGMPTAAQWLSELLPATHFMRLIRGIVLRGADLADLWRDTLWLALFTLFGL 353
             +G + P   +  A + + EL P ++F+   RGI  +G     L      +A+     L
Sbjct: 839 QFAGMITPVSALEGAGRVIGELHPISYFLTASRGIFSKGLGFETLDFAVFAIAISIPITL 898

Query: 354 MLAALRFKK 362
            LA +  +K
Sbjct: 899 WLATVLLRK 907