Pairwise Alignments

Query, 365 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 925 a.a., ABC transporter permease from Agrobacterium fabrum C58

 Score =  141 bits (355), Expect = 8e-38
 Identities = 94/338 (27%), Positives = 172/338 (50%), Gaps = 14/338 (4%)

Query: 13  KEFRQLSRDRITFGMVVMIPLIQLLLFGFAINTDVRNIPIGVVDQSDSSFSRLLVESVKV 72
           +E  +L RD I   + V+  +I + + G+ IN DV ++   V+D+ DS+ SR  V  +  
Sbjct: 563 REALELQRDPIRGTLAVLGSVILMFVIGYGINLDVEDLSFAVLDRDDSTISRDYVLDIAG 622

Query: 73  TQVIRVKQHYLTVNEAEKAIASGDIRAALILPSDL---VARSQQQRELGQWLIDGSDTMI 129
           ++    K+      + ++ +  G++  A+ +P      V R +   E+G W IDG+    
Sbjct: 623 SRYFIEKEPIRDYADMDRRMRDGELSLAIEIPPGFGRDVLRGKTV-EVGAW-IDGAMPQR 680

Query: 130 AGALLG-LKNMPLTDLPTLGIQ-------PLTPTFEITLLYNPSRRSAVNIVPGLLGVIL 181
           A  + G ++ M  T L     +         + + E    YNP  +S V +VP ++ ++L
Sbjct: 681 AETVRGYVQGMHQTWLARKASEIYGNAATQSSFSIETRYRYNPDVKSLVAMVPAVIPLLL 740

Query: 182 TMTMILFTSAAIVRERERGNLELLITTPVHSIELMIGKIVPYIFVGLIQVAIILGLGHFI 241
            +   +  + ++VRE+E G++  L  TP   +E +IGK +PY+ +G++   ++     FI
Sbjct: 741 MLIPAMLAALSVVREKELGSIVNLYVTPTTRLEFLIGKQLPYVALGMLNFLLLTAFAIFI 800

Query: 242 FAVPINGALSQILFGTLLFISASLTLGLVISTIANTQLQAMQMTVFI-LLPSILLSGFMF 300
           F VP  G+      G LLF+  + ++GLV+S+   +Q+ A+  T  + L+P+   SG + 
Sbjct: 801 FQVPFTGSYLAYATGALLFVIIATSIGLVMSSFMKSQIAAIFGTALLTLIPATQYSGMID 860

Query: 301 PYEGMPTAAQWLSELLPATHFMRLIRGIVLRGADLADL 338
           P   +  A  ++  + PAT+FM + RG   +G D A L
Sbjct: 861 PVSSLQGAGAFIGNIYPATYFMTISRGTFSKGLDFAGL 898