Pairwise Alignments

Query, 308 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 326 a.a., Vitamin B12 import ATP-binding protein BtuD from Xanthobacter sp. DMC5

 Score =  229 bits (585), Expect = 5e-65
 Identities = 132/314 (42%), Positives = 183/314 (58%), Gaps = 13/314 (4%)

Query: 3   DYAIHAENVVKQFGHFTAIENINLKVERGSIYGFLGPNGCGKSTTIRVLTGLLQPTAGQI 62
           D  I  E + K FG    ++N+ ++V RG IYGFLGPNG GK+TTIR+L GLL P AG+ 
Sbjct: 13  DVVIEVEGLSKSFGGHRVVDNLTMRVRRGQIYGFLGPNGSGKTTTIRMLCGLLTPDAGRG 72

Query: 63  KVLGLSIPKQSELLRLKIGYMTQKFSLYDDLTVQENLQFIGQIFGMNRSTLQQRTQAQLK 122
             LG+ I  +S  +R  +GYMTQ+FSLY DL+V+ENL+F+ +++G+ +   +    A L+
Sbjct: 73  TCLGMDILTESRAIREHVGYMTQRFSLYQDLSVRENLEFVARLYGVPQP--EAAASAALQ 130

Query: 123 TYGLDERRKQRVSGMSGGQKQRLALAAATMHNPELLFLDEHTSAVDPENRREFWEQLFDL 182
             GL  R KQ    +SGG KQRLAL A  +  P+LL LDE T+ VDP+ RREFWEQ+ DL
Sbjct: 131 RLGLGGRGKQLAGALSGGWKQRLALGACILPGPDLLLLDEPTAGVDPQARREFWEQIHDL 190

Query: 183 SAQGTTILVTTHYMDEAERCHRLAIMEAGEIRADDEPEKLMQQMGVN--VVEIKAPA--- 237
           +A+G T+LV+THYMDEAERCH +A +  G++ A    + ++   G+    VE+K  A   
Sbjct: 191 AAEGLTVLVSTHYMDEAERCHEIAYIAYGKLLAQGTVQSVIAAAGLTTVTVEVKGEAGQE 250

Query: 238 ----LRSLKEKLLNFSQVRSAAQLGIRLRVLVHRDVIDPILWLRHTFPQLAAAELTLARP 293
                R L   L   + V   A  G  L +   RD       L   F   A        P
Sbjct: 251 AGRLARDLARDLSQRAGVDMVAPFGTALHI-SGRDAAALEAALA-PFRSDARLAFRADAP 308

Query: 294 SLEDVFVTVTGKGR 307
           +LEDVF+ +  + +
Sbjct: 309 TLEDVFIDLMRRSK 322