Pairwise Alignments

Query, 308 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 913 a.a., ABC-type multidrug transport system, permease component from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  195 bits (496), Expect = 3e-54
 Identities = 96/231 (41%), Positives = 151/231 (65%), Gaps = 1/231 (0%)

Query: 3   DYAIHAENVVKQFGHFTAIENINLKVERGSIYGFLGPNGCGKSTTIRVLTGLLQPTAGQI 62
           + AI A+++  +FG F A++++N ++ RG I+GFLG NGCGKSTT+++LTGLL  + GQ 
Sbjct: 274 EIAIEAKDLTMRFGKFVAVDHVNFRIPRGEIFGFLGSNGCGKSTTMKMLTGLLPASEGQA 333

Query: 63  KVLGLSIPKQSELLRLKIGYMTQKFSLYDDLTVQENLQFIGQIFGMNRSTLQQRTQAQLK 122
            + G  +       R ++GYM+Q FSLY++LTV++NL+   ++F +  + +  R    ++
Sbjct: 334 WLFGQPVDPNDIDTRRRVGYMSQAFSLYNELTVRQNLELHARLFHIPPAEIPARVAQMIE 393

Query: 123 TYGLDERRKQRVSGMSGGQKQRLALAAATMHNPELLFLDEHTSAVDPENRREFWEQLFDL 182
            + L E      + +  G +QRL+LA A +H PE+L LDE TS VDP  R  FW+ + DL
Sbjct: 394 RFMLTEVEDTLPASLPLGIRQRLSLAVAVIHRPEMLILDEPTSGVDPVARDMFWQLMVDL 453

Query: 183 SAQG-TTILVTTHYMDEAERCHRLAIMEAGEIRADDEPEKLMQQMGVNVVE 232
           S Q   TI ++TH+M+EAERC R+++M AG++ A   P++L+QQ G   +E
Sbjct: 454 SRQDKVTIFISTHFMNEAERCDRMSLMHAGKVLASGTPQELVQQRGAANLE 504



 Score =  130 bits (326), Expect = 2e-34
 Identities = 78/220 (35%), Positives = 123/220 (55%), Gaps = 6/220 (2%)

Query: 9   ENVVKQFGHFTAIENINLKVERGSIYGFLGPNGCGKSTTIRVLTGLLQPTAGQIKVLG-- 66
           E V + +G   A+ NI L +   S+ G +GP+G GKS+ + +++G      G + VLG  
Sbjct: 16  EGVSQHYGKTVALNNITLDIPARSMVGLIGPDGVGKSSLLSLISGARVIEQGNVIVLGGD 75

Query: 67  LSIPKQSELLRLKIGYMTQKF--SLYDDLTVQENLQFIGQIFGMNRSTLQQRTQAQLKTY 124
           +   K    +  +I +M Q    +LY  L+V EN+ F  ++FG +++  + R    L + 
Sbjct: 76  MRDAKHRRDVCPRIAWMPQGLGKNLYHTLSVYENVDFFARLFGHDKAEREARITELLNST 135

Query: 125 GLDERRKQRVSGMSGGQKQRLALAAATMHNPELLFLDEHTSAVDPENRREFWEQLFDLSA 184
           GL   R +    +SGG KQ+L L  A +++PELL LDE T+ VDP +R +FW+ +  +  
Sbjct: 136 GLAPFRDRPAGKLSGGMKQKLGLCCALIYDPELLILDEPTTGVDPLSRAQFWDLIDSIRQ 195

Query: 185 QGT--TILVTTHYMDEAERCHRLAIMEAGEIRADDEPEKL 222
           + T  ++LV T YM+EAER   L  M AGEI A    ++L
Sbjct: 196 RQTNMSVLVATAYMEEAERFDWLVAMNAGEILATGSAQQL 235