Pairwise Alignments

Query, 308 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 911 a.a., ribosome-associated ATPase/putative transporter RbbA from Escherichia coli ECRC62

 Score =  190 bits (483), Expect = 1e-52
 Identities = 92/232 (39%), Positives = 151/232 (65%), Gaps = 1/232 (0%)

Query: 2   SDYAIHAENVVKQFGHFTAIENINLKVERGSIYGFLGPNGCGKSTTIRVLTGLLQPTAGQ 61
           ++ AI A ++  +FG F A++++N ++ RG I+GFLG NGCGKSTT+++LTGLL  + G+
Sbjct: 273 AEIAIEARDLTMRFGSFVAVDHVNFRIPRGEIFGFLGSNGCGKSTTMKMLTGLLPASEGE 332

Query: 62  IKVLGLSIPKQSELLRLKIGYMTQKFSLYDDLTVQENLQFIGQIFGMNRSTLQQRTQAQL 121
             + G  +  +    R ++GYM+Q FSLY++LTV++NL+   ++F +  + +  R     
Sbjct: 333 AWLFGQPVDPKDIDTRRRVGYMSQAFSLYNELTVRQNLELHARLFHIPEAEIPARVAEMS 392

Query: 122 KTYGLDERRKQRVSGMSGGQKQRLALAAATMHNPELLFLDEHTSAVDPENRREFWEQLFD 181
           + + L++        +  G +QRL+LA A +H PE+L LDE TS VDP  R  FW+ + D
Sbjct: 393 ERFKLNDVEDILPESLPLGIRQRLSLAVAVIHRPEMLILDEPTSGVDPVARDMFWQLMVD 452

Query: 182 LSAQG-TTILVTTHYMDEAERCHRLAIMEAGEIRADDEPEKLMQQMGVNVVE 232
           LS Q   TI ++TH+M+EAERC R+++M AG++ A   P++L+++ G   +E
Sbjct: 453 LSRQDKVTIFISTHFMNEAERCDRISLMHAGKVLASGTPQELVEKRGAASLE 504



 Score =  132 bits (333), Expect = 2e-35
 Identities = 78/221 (35%), Positives = 122/221 (55%), Gaps = 6/221 (2%)

Query: 11  VVKQFGHFTAIENINLKVERGSIYGFLGPNGCGKSTTIRVLTGLLQPTAGQIKVLG--LS 68
           V + +G   A+ NI L +    + G +GP+G GKS+ + +++G      G + VLG  + 
Sbjct: 18  VSQHYGKTVALNNITLDIPARCMVGLIGPDGVGKSSLLSLISGARVIEQGNVMVLGGDMR 77

Query: 69  IPKQSELLRLKIGYMTQKF--SLYDDLTVQENLQFIGQIFGMNRSTLQQRTQAQLKTYGL 126
            P+       +I +M Q    +LY  L+V EN+ F  ++FG +++  + R    L + GL
Sbjct: 78  DPRHRRDACPRIAWMPQGLGKNLYHTLSVYENVDFFARLFGHDKAEREVRINELLTSTGL 137

Query: 127 DERRKQRVSGMSGGQKQRLALAAATMHNPELLFLDEHTSAVDPENRREFWEQLFDLSAQ- 185
              R +    +SGG KQ+L L  A +H+PELL LDE T+ VDP +R +FW+ +  +  + 
Sbjct: 138 APFRDRPAGKLSGGMKQKLGLCCALIHDPELLILDEPTTGVDPLSRAQFWDLIDSIRQRQ 197

Query: 186 -GTTILVTTHYMDEAERCHRLAIMEAGEIRADDEPEKLMQQ 225
              ++LV T YM+EAER   L  M AGE+ A    E+L QQ
Sbjct: 198 SNMSVLVATAYMEEAERFDWLVAMNAGEVLATGSAEELRQQ 238