Pairwise Alignments

Query, 308 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 925 a.a., ABC transporter permease from Agrobacterium fabrum C58

 Score =  198 bits (504), Expect = 4e-55
 Identities = 96/231 (41%), Positives = 147/231 (63%), Gaps = 1/231 (0%)

Query: 3   DYAIHAENVVKQFGHFTAIENINLKVERGSIYGFLGPNGCGKSTTIRVLTGLLQPTAGQI 62
           DYAI A ++  +FG FTA++N++ K+ RG I+GFLG NGCGKSTT+++LTGLL  + G+ 
Sbjct: 280 DYAIEASHLSMRFGDFTAVDNVSFKIPRGEIFGFLGSNGCGKSTTMKMLTGLLAASEGEA 339

Query: 63  KVLGLSIPKQSELLRLKIGYMTQKFSLYDDLTVQENLQFIGQIFGMNRSTLQQRTQAQLK 122
           K+ G  +      +R ++GYM+Q FSLY +LTV++NL    ++F +  +T+Q R     +
Sbjct: 340 KLFGHKVDASDMAIRHRVGYMSQAFSLYSELTVRQNLDLHARLFKLPEATIQPRIAEMAE 399

Query: 123 TYGLDERRKQRVSGMSGGQKQRLALAAATMHNPELLFLDEHTSAVDPENRREFWEQLFDL 182
            + L          +  G +QRL+LA A +H+P++L LDE TS VDP  R  FW+ L DL
Sbjct: 400 RFDLGTVMDTLPDDLPLGIRQRLSLAVAMIHSPDILILDEPTSGVDPVARDGFWQILADL 459

Query: 183 SA-QGTTILVTTHYMDEAERCHRLAIMEAGEIRADDEPEKLMQQMGVNVVE 232
           S     TI ++TH+M+EAERC R+++M AG++   D P+ + +      +E
Sbjct: 460 SRNDNVTIFISTHFMNEAERCDRISLMHAGKVLISDTPDAITKSRNAETLE 510



 Score =  137 bits (344), Expect = 1e-36
 Identities = 83/246 (33%), Positives = 138/246 (56%), Gaps = 7/246 (2%)

Query: 15  FGHFTAIENINLKVERGSIYGFLGPNGCGKSTTIRVLTGLLQPTAGQIKVLG--LSIPKQ 72
           FG   A+ +I++++  G + G +GP+G GKS+ + +++G      G ++VL   +S P+ 
Sbjct: 27  FGSTVALADISVEIPAGRMIGLIGPDGVGKSSLLSLISGARAIQKGNVEVLAGDMSDPRH 86

Query: 73  SELLRLKIGYMTQKF--SLYDDLTVQENLQFIGQIFGMNRSTLQQRTQAQLKTYGLDERR 130
            E    +I YM Q    +LY  L+V EN+ F G++FG +    + R    LK+ GL+   
Sbjct: 87  REDTCPRIAYMPQGLGKNLYPTLSVFENIDFFGRLFGQDGRERKARIAELLKSTGLERFA 146

Query: 131 KQRVSGMSGGQKQRLALAAATMHNPELLFLDEHTSAVDPENRREFWEQLFDLSA--QGTT 188
            +    +SGG KQ+L L  A +H+P+LL LDE T+ VDP +RR+FWE +  + A   G +
Sbjct: 147 DRPAMKLSGGMKQKLGLCCALIHDPDLLILDEPTTGVDPLSRRQFWELIDSIRAGRPGMS 206

Query: 189 ILVTTHYMDEAERCHRLAIMEAGEIRADDEPEKLMQQMGVNVVEIKAPALRSLKEKLLNF 248
           ++V T YM+EA     L  M+ G+I A   P +L+++     ++    AL   +EK  ++
Sbjct: 207 VIVATAYMEEAAGFDWLVAMDGGKILATGSPGELLERTSTANLDAAFIALLP-EEKRKDY 265

Query: 249 SQVRSA 254
            +V  A
Sbjct: 266 HEVHIA 271