Pairwise Alignments

Query, 315 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 402 a.a., efflux RND transporter periplasmic adaptor subunit from Rhodanobacter sp000427505 FW510-R12

 Score = 60.5 bits (145), Expect = 7e-14
 Identities = 62/226 (27%), Positives = 102/226 (45%), Gaps = 24/226 (10%)

Query: 52  EGEHVKVGDVLVKLDSQIQTTLLTQA---LAQQAKAQASLNKLTNGERPEDIAVAQARVA 108
           +G+ V  GDVLV+LD       L  A   LA   +    L    NG +  D+A  +  V 
Sbjct: 87  DGDLVHAGDVLVRLDPSDADVALAGAKANLAATVRKVRGLYSSMNGAQ-ADVAARKTAVD 145

Query: 109 KARAQHKEAELTLNRKAELVAKQLISQSEVDAARSARDSAQAELASAHEEFTKLTAGARI 168
           KARA ++       R+  L     IS  E+  A  A  SA++ L +A +++   T+   +
Sbjct: 146 KARADYQ-------RRVALAKSGAISAEELAHASDALTSAESNLVTAQQQYQ--TSKVLV 196

Query: 169 ED-IEQAKAELAVAQANVTLQQQKLDELTILATRDGILDSLPYHLGERVANNAVVAIVQA 227
           +D +  +  ++  A A +       +  T++A  DG +      +G+RV   A +  V  
Sbjct: 197 DDTVVASHPDVQAAAARLRAAFLDDERATLVAPVDGYVAKRSVQVGQRVQPGAALMAV-- 254

Query: 228 DRLPYARVYVPA----THRAAFVVGQTVTVHVD--GIKDQYQGKIR 267
             +P  +V+V A    T      +GQ VT+  D  G K  Y+GK++
Sbjct: 255 --VPLHQVWVDANFKETQLTDMRIGQPVTIESDVYGGKVAYKGKVQ 298