Pairwise Alignments

Query, 315 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 361 a.a., Membrane protein from Variovorax sp. SCN45

 Score = 71.6 bits (174), Expect = 3e-17
 Identities = 55/202 (27%), Positives = 91/202 (45%), Gaps = 2/202 (0%)

Query: 44  IIRELPIAEGEHVKVGDVLVKLDSQIQTTLLTQALAQQAKAQASLNKLTNGERPEDIAVA 103
           +I ++ + +G+ VK G  LV LD  +Q     Q   Q   A A LN+L    R E +A+A
Sbjct: 71  LIAQVLVHDGQAVKAGTPLVMLDDSVQKATTEQLRLQAEAALALLNELQAQPRKEVLAIA 130

Query: 104 QARVAKARAQHKEAE--LTLNRKAELVAKQLISQSEVDAARSARDSAQAELASAHEEFTK 161
           +A+V  A++  K A+      R +  +    IS+  +D A  A   A A L  A  ++  
Sbjct: 131 KAQVDLAQSSLKVADDQFAKRRASYNIDPHSISKDALDTADDAVRQAAAALEVARRQYVL 190

Query: 162 LTAGARIEDIEQAKAELAVAQANVTLQQQKLDELTILATRDGILDSLPYHLGERVANNAV 221
             AGA   DIE  + +    Q +    Q  L +  + A  DG++ ++   +G  V++  V
Sbjct: 191 AHAGAWSYDIENQRRQYEALQQSYRASQALLQKYVVTARMDGVVLAVNASVGSYVSSLGV 250

Query: 222 VAIVQADRLPYARVYVPATHRA 243
           +      + P   +  P  H A
Sbjct: 251 LDSYTQTQAPLVVMSTPQDHLA 272