Pairwise Alignments

Query, 315 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 345 a.a., HlyD family secretion protein from Sphingobium sp. HT1-2

 Score = 75.5 bits (184), Expect = 2e-18
 Identities = 62/259 (23%), Positives = 114/259 (44%), Gaps = 1/259 (0%)

Query: 23  PPQALGTLERDRITFSATSNEIIRELPIAEGEHVKVGDVLVKLDSQIQTTLLTQALAQQA 82
           P Q  G +E   +  ++  +  I    + EG+ VK G +L  LDS        QA    A
Sbjct: 50  PDQLQGMVEARELRITSKVSARITAFHVEEGQPVKTGQLLYTLDSPEVEARSEQAGGALA 109

Query: 83  KAQASLNKLTNGERPEDIAVAQARVAKARAQHKEAELTLNRKAELVAKQLISQSEVDAAR 142
            AQA+ +K   G RPEDI  A+A+  +A+A    A+ T  R   L  + +++  + D +R
Sbjct: 110 AAQANADKADEGARPEDIRAAEAQWRRAQAAADLAQTTYQRTERLFEQGVLAGQKRDESR 169

Query: 143 SARDSAQAELASAHEEFTKLTAGARIEDIEQAKAELAVAQANVTLQQQKLDELTILATRD 202
           +   ++     +A  ++    AGAR +D + A  ++  A+  +   +    E  + A  D
Sbjct: 170 ANALASNEAARAARAQYDLALAGARRQDRQAASGQVRQARGALAEVEAAEKETRVFAPSD 229

Query: 203 GILDSLPYHLGERVANNAVVAIVQADRLPYARVYVPATHRAAFVVGQTVTVHVDGIKDQ- 261
           G +       GE V     V ++     P+  + +     +A   G+ +T  +  + D+ 
Sbjct: 230 GEIGRRLAQSGELVPQGFPVFVLTDIDHPWVTLTLREDQFSAIRRGRVLTGRIPALGDRC 289

Query: 262 YQGKIRWVANEPSFTPYYA 280
            Q ++ ++A    F  + A
Sbjct: 290 AQFRVFYIAPAGDFATWRA 308