Pairwise Alignments

Query, 315 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 363 a.a., HlyD-like membrane fusion protein YhiI from Sphingobium sp. HT1-2

 Score = 79.7 bits (195), Expect = 1e-19
 Identities = 78/324 (24%), Positives = 151/324 (46%), Gaps = 26/324 (8%)

Query: 6   SIASLLALLLSACSAENPPQAL----GTLERDRITFSATSNEIIRELPIAEGEHVKVGDV 61
           ++A +  LL +       P+ +    G LE   I  ++ S   I+++   EG+ VK G++
Sbjct: 16  AVAGIAFLLWTLLKPAGLPEGIVGGNGRLEATEIDVASKSAGRIKDIVADEGQLVKAGEI 75

Query: 62  LVKLDSQIQTTLLTQALAQQAKAQAS--LNKLTNGERPEDIAVAQA----RVAKARAQHK 115
           +  +D  +     T+A+AQ A+AQ +  + +    +R  + A AQA    R+A+  A  K
Sbjct: 76  VAHMDVDVLDAQRTEAVAQLAEAQNAVLVAQTQVAQRESEKAAAQAVVRQRIAELNASRK 135

Query: 116 ---EAELTLNRKAELVAKQLISQSEVDAARSARDSAQAELASAHEEFTKLTAGARIEDIE 172
               +E      A  V ++    ++ + A +A ++A+A+LASA    T          + 
Sbjct: 136 RLARSETLAREGATAVQERDDDAAQTEGAAAAVEAARAQLASAEVAITNAR-----NQVI 190

Query: 173 QAKAELAVAQANVTLQQQKLDELTILATRDGILDSLPYHLGERV-ANNAVVAIVQADRLP 231
            +++ +   +A +   +  +++ ++ A RDG +       GE V A   V+++V    + 
Sbjct: 191 GSRSRVEAGRATIQRIEADINDSSLRAPRDGRVQYRVAQPGEVVTAGGRVLSLVDLSDVT 250

Query: 232 YARVYVPATHRAAFVVGQTVTVHVDGIKD-QYQGKIRWVANEPSFTPYYALTEKERSRLM 290
            +  ++PAT      +G    + +D I D     +I +VA+   FTP    T+ ER ++M
Sbjct: 251 IS-FFLPATAAGRVAIGSEARIVLDAIPDYPIPARISFVADVAQFTPKTVETQSEREKMM 309

Query: 291 Y--LAEVD---LPESAMDLPSGLP 309
           +   A +D   L +    + +GLP
Sbjct: 310 FRVKARIDPALLRKHIAQVKTGLP 333