Pairwise Alignments

Query, 315 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 462 a.a., efflux transporter periplasmic adaptor subunit from Pontibacter actiniarum KMM 6156, DSM 19842

 Score = 58.9 bits (141), Expect = 2e-13
 Identities = 72/285 (25%), Positives = 129/285 (45%), Gaps = 36/285 (12%)

Query: 41  SNEIIRELPIAEGEHVKVGDVLVKLDSQIQTTLLTQALAQQAKAQASLNKLTNGERPEDI 100
           S EII EL + EG+ V  G +L+++      +++          QAS+N +       ++
Sbjct: 73  SGEII-ELNVEEGDSVVKGQLLLRIRPDNYQSMVDAQ-------QASVNTMR-----ANL 119

Query: 101 AVAQARVAKARAQHKEAELTLNRKAELVAKQLISQSEVDAARSARDSAQAELASAHEEFT 160
           A A+AR+A+A+A   + E    R   L  +++ISQSE     +   + + E+ SA +   
Sbjct: 120 AQAKARLAQAQANFAQVEQNYKRNRPLFEQKVISQSEWQEIEANYLATKQEVESARQS-- 177

Query: 161 KLTAGARIEDIEQAKAELAVAQANVTLQQQKLDELTILATRDGILDSLPYHLGERVANNA 220
                     +  ++  +  AQA++   ++ L++ TI A   G +  L    GERV   +
Sbjct: 178 ----------VRASEFNVQNAQASLKDARENLNKTTIYAPVSGTVSKLNVEQGERVVGTS 227

Query: 221 VVAIVQADRLP-----YARVYVPATHRAAFVVGQTVTVHVDGI---KDQYQGKIRWVAN- 271
            +A  +  R+        RV V         +G +V V VD      ++++G +  +AN 
Sbjct: 228 QMAGTEIMRIANLNNMEVRVNVNENDIIRVALGDSVIVEVDSYTSRDEKFKGVVTSIANT 287

Query: 272 EPSFTPYYALTEKE-RSRLMYLAEVDLPES-AMDLPSGLPAQVDL 314
               T   A+TE E R RL+  +   L ++ +     G+ A VD+
Sbjct: 288 AKDATTLEAVTEFEVRIRLLNQSYDHLRKNISRPFRPGMTASVDI 332