Pairwise Alignments

Query, 315 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 313 a.a., secretion protein HlyD from Magnetospirillum magneticum AMB-1

 Score = 98.6 bits (244), Expect = 2e-25
 Identities = 76/311 (24%), Positives = 149/311 (47%), Gaps = 5/311 (1%)

Query: 7   IASLLALLLSACSAENPPQALGTLERDRITFSATSNEIIRELPIAEGEHVKVGDVLVKLD 66
           +A +L LL +   AE P +  G +E + +  + T    +  + + EGE V  G  L  LD
Sbjct: 4   LACILCLLPALALAE-PLRLQGYVEGEYVRVAPTGAGTLAGVEVREGERVTAGAPLFALD 62

Query: 67  SQIQTTLLTQALAQQAKAQASLNKLTNGERPEDIAVAQARVAKARAQHKEAELTLNRKAE 126
           + ++  +  QA+A   +A+A L  L  G+RP+++     + A+A A  + +E TL R+  
Sbjct: 63  TLVERAVRDQAVADLERAEAQLADLRKGKRPDELKAIAEQKAEALAALRLSEATLKRQDI 122

Query: 127 LVAKQLISQSEVDAARSARDSAQAELASAHEEFTKLTAGARIEDIEQAKAELAVAQANVT 186
           L      S++ +D AR+A +  +A++     E+     GAR ++I   +A +   +  + 
Sbjct: 123 LARNDYASRARLDEARAALERDRAQVRRLEAEYRTALLGARPDEIAAQEALVGQKRLELA 182

Query: 187 LQQQKLDELTILATRDGILDSLPYHLGERV-ANNAVVAIVQADRLPYARVYVPATHRAAF 245
              ++L +L+  A  D +++ + Y +GE V A   VV+++    +     ++P     A 
Sbjct: 183 KADKRLLDLSPKAPADAVVEKVYYRVGEFVPAGQPVVSLLPPGNVKLV-FFLPEPRLGAV 241

Query: 246 VVGQTVTVHVDGIKDQYQGKIRWVANEPSFTPYYALTEKERSRLMYLAEVDLPESA-MDL 304
            +G  V    D      + ++ ++A +  +TP    + + R +L++  E     +A + L
Sbjct: 242 KLGDAVGYACDRCA-AGEARVSFIATQAEYTPPVIYSVESRDKLVFRVEARGAAAAPLAL 300

Query: 305 PSGLPAQVDLP 315
             G P  V +P
Sbjct: 301 NPGQPVDVSVP 311