Pairwise Alignments

Query, 315 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 331 a.a., Predicted membrane fusion protein (MFP) component of efflux pump, membrane anchor protein YbhG from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  125 bits (315), Expect = 1e-33
 Identities = 94/318 (29%), Positives = 159/318 (50%), Gaps = 6/318 (1%)

Query: 1   MIQSLSIASLLALLLSAC----SAENPPQAL-GTLERDRITFSATSNEIIRELPIAEGEH 55
           ++  L+IA+++A++        S ++    L G ++   +  S      +  L + EG+ 
Sbjct: 5   VVIGLAIAAIVAVIAGGTWWYQSRQDDGLTLYGNVDIRTVNISFRVGGRLASLNVDEGDT 64

Query: 56  VKVGDVLVKLDSQIQTTLLTQALAQQAKAQASLNKLTNGERPEDIAVAQARVAKARAQHK 115
           +K G VL +LD       L QA A  + AQA  + +  G R E+IA A A V +A+A + 
Sbjct: 65  IKAGQVLGELDHAPYENALMQAKAGVSVAQAQYDLMLAGYRDEEIAQAAAAVRQAQAAYD 124

Query: 116 EAELTLNRKAELVAKQLISQSEVDAARSARDSAQAELASAHEEFTKLTAGARIEDIEQAK 175
            A+   NR+  L   + IS ++++ ARS+RD AQA L SA ++ ++   G R +DI QAK
Sbjct: 125 YAQNFYNRQQGLWKSRTISANDLENARSSRDQAQATLKSAQDKLSQYRTGNREQDIAQAK 184

Query: 176 AELAVAQANVTLQQQKLDELTILATRDGILDSLPYHLGERVANNAVVAIVQADRLPYARV 235
           A L  A+A +   Q  L + T++A  +G L +     G  +   + V  +   R  + R 
Sbjct: 185 ASLEQAKAQLAQAQLDLQDTTLIAPANGTLLTRAVEPGSMLNAGSTVLTLSLTRPVWVRA 244

Query: 236 YVPATHRAAFVVGQTVTVHVDGIKDQ-YQGKIRWVANEPSFTPYYALTEKERSRLMYLAE 294
           YV   + +    G+ + ++ DG  D+ Y GKI +V+    FTP    T   R+ L+Y   
Sbjct: 245 YVDERNLSQTQPGRDILLYTDGRPDKPYHGKIGFVSPTAEFTPKTVETPDLRTDLVYRLR 304

Query: 295 VDLPESAMDLPSGLPAQV 312
           + + ++   L  G+P  V
Sbjct: 305 IIVTDADDALRQGMPVTV 322