Pairwise Alignments

Query, 315 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 312 a.a., HlyD family efflux transporter periplasmic adaptor subunit from Erwinia tracheiphila SCR3

 Score = 89.0 bits (219), Expect = 1e-22
 Identities = 69/303 (22%), Positives = 138/303 (45%), Gaps = 4/303 (1%)

Query: 15  LSACSAENPPQALGTLERDRITFSATSNEIIRELPIAEGEHVKVGDVLVKLDSQIQTTLL 74
           L+AC   +     G    D +  +A     I  L I +G+ VK G +LVK++       L
Sbjct: 3   LTACDNSSALIYQGYSYGDFVYLAANETAKIDTLLINKGDRVKAGQLLVKMERFTAENAL 62

Query: 75  TQALAQQAKAQASLNKLTNGERPEDIAVAQARVAKARAQHKEAELTLNRKAELVAKQLIS 134
            +A        A+L  L +GERP ++ +  +++ KAR+  ++A+  L R   L   ++IS
Sbjct: 63  EKAEKNYLAEVATLRNLQSGERPAELNIIHSQLQKARSVAEQAQRQLERYQALFRTKVIS 122

Query: 135 QSEVDAARSARDSAQAELASAHEEFTKLTAGARIEDIEQAKAELAVAQANVTLQQQKLDE 194
            +E + AR      +A++     +       AR  +I + +A +  A+         + +
Sbjct: 123 ATEWENAREDYAQKRAQVDELFHQLEAKKLPAREAEIHRQQAIVESARVQRDKADWDIRQ 182

Query: 195 LTILATRDGILDSLPYHLGER-VANNAVVAIVQADRLPYARVYVPATHRAAFVVGQTVTV 253
           L I++ +D  +  + Y  GER +A   +V+++    +   R +VP         G  V +
Sbjct: 183 LEIVSPQDAKVFDILYRPGERPLAGRPIVSLLPEGNVK-VRFFVPEKVVGVLRTGMKVRI 241

Query: 254 HVDGIKDQYQGKIRWVANEPSFTPYYALTEKERSRLMYLAEV--DLPESAMDLPSGLPAQ 311
           + DG        + +++ +  ++P    + K R +L+++ E   +  + A  +  GLP +
Sbjct: 242 YFDGYSGYVPCLLNYISPQAEYSPPVIYSSKRREKLLFMVEAVPEKTQQASLVKPGLPMR 301

Query: 312 VDL 314
           V++
Sbjct: 302 VEI 304