Pairwise Alignments

Query, 315 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 390 a.a., efflux pump membrane protein (multidrug resistance protein A) from Enterobacter asburiae PDN3

 Score = 53.1 bits (126), Expect = 1e-11
 Identities = 65/224 (29%), Positives = 99/224 (44%), Gaps = 26/224 (11%)

Query: 54  EHVKVGDVLVKLDSQIQTTLLTQALAQQAKAQASLNKLTNGERPEDI--AVAQARVAKAR 111
           + V+ GDVLV LD        T A     KAQ +L       R   I     QA +   +
Sbjct: 81  DFVQKGDVLVTLDP-------TDAQQAFEKAQTALASSVRQTRQLMINSKQLQANIDVQK 133

Query: 112 AQHKEAELTLNRKAELVAKQLISQSEVDAARSARDSAQAELASAHEEFT---KLTAGARI 168
               +A+  LNR+  L    LI + E+  AR A  SAQA+L  A +++     +  G  +
Sbjct: 134 TALAQAQSDLNRRVPLGTANLIGREELQHARDAVASAQAQLDVAIQQYNANQAMVLGTSL 193

Query: 169 ED---IEQAKAELAVAQANVTLQQQKLDELTILATRDGILDSLPYHLGERVA-NNAVVAI 224
           E+   ++QA  E  V  A + LQ+ K     I++   G +       G +++    ++A+
Sbjct: 194 ENQPAVQQAATE--VRNAWLALQRTK-----IVSPMTGYVSRRSVQPGAQISPTTPLMAV 246

Query: 225 VQADRLPYARVYVPATHRAAFVVGQTVTVHVD--GIKDQYQGKI 266
           V AD L +       T  A   +GQT TV  D  G   +Y GK+
Sbjct: 247 VPADNL-WVDANFKETQLAHMRIGQTATVVSDIYGDDVKYTGKV 289