Pairwise Alignments

Query, 315 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 331 a.a., Multidrug resistance efflux pump from Enterobacter asburiae PDN3

 Score =  123 bits (308), Expect = 7e-33
 Identities = 84/269 (31%), Positives = 136/269 (50%), Gaps = 1/269 (0%)

Query: 45  IRELPIAEGEHVKVGDVLVKLDSQIQTTLLTQALAQQAKAQASLNKLTNGERPEDIAVAQ 104
           +  L + EG+ +K G  L  LD       L QA A  + AQA  + +  G R E+IA A 
Sbjct: 54  LASLSVDEGDAIKSGQTLGMLDKAPYENALLQAKAGVSVAQAQYDLMLAGYRDEEIAQAA 113

Query: 105 ARVAKARAQHKEAELTLNRKAELVAKQLISQSEVDAARSARDSAQAELASAHEEFTKLTA 164
           A V +A+A +  A+    R+  L   + IS ++++ ARS+RD AQA L SA ++ ++   
Sbjct: 114 AAVKQAQAAYDYAQNFYARQQGLWKSRTISANDLENARSSRDQAQATLKSAQDKLSQYHT 173

Query: 165 GARIEDIEQAKAELAVAQANVTLQQQKLDELTILATRDGILDSLPYHLGERVANNAVVAI 224
           G R +DI QAKA L  AQA +   +  L + T++A  DG+L +     G  ++  + V  
Sbjct: 174 GNRPQDIAQAKASLEQAQAQLAQAELDLHDTTLIAPSDGMLMTRAVEPGSMLSAGSTVLT 233

Query: 225 VQADRLPYARVYVPATHRAAFVVGQTVTVHVDGIKDQ-YQGKIRWVANEPSFTPYYALTE 283
           +   R  + R YV   +      G+ + ++ DG  D+ Y GK+ +V+    FTP    T 
Sbjct: 234 LSLTRPVWVRAYVDEPNLGQMQPGRELLLYTDGRPDKPYHGKVGFVSPTAEFTPKTVETP 293

Query: 284 KERSRLMYLAEVDLPESAMDLPSGLPAQV 312
             R+ L+Y   + + ++   L  G+P  V
Sbjct: 294 DLRTDLVYRLRIIVTDADDALRQGMPVTV 322