Pairwise Alignments

Query, 315 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 364 a.a., Multidrug resistance efflux pump from Enterobacter asburiae PDN3

 Score = 61.2 bits (147), Expect = 4e-14
 Identities = 69/254 (27%), Positives = 112/254 (44%), Gaps = 43/254 (16%)

Query: 33  DRITFSATSNEIIRELPIAEGEHVKVGDVLVKLDSQIQTTLLTQALAQ---------QAK 83
           D +T +  +   + EL + + + VK GD+LV +D +       QA AQ         QA+
Sbjct: 62  DVVTIAPKTAGYVTELRVRDNQRVKKGDLLVVIDPRDTAAQRDQAQAQLGLAIAQLHQAQ 121

Query: 84  AQASLNKLTNGERPEDIAVAQARVAKARAQHKEAELTLNRKAELVAKQLISQSEVDAARS 143
           AQ +L+K+   + P     A+A+V KA+A    A+    R+   V  +  +Q  +D+A +
Sbjct: 122 AQLALSKV---QYPAQRDEAKAQVLKAQADLANAQAEYRRQRG-VDPRATTQQSIDSANA 177

Query: 144 ARDSAQAELASAHEEFT------------KLTAGARIEDIEQAKAELAVAQANVTLQQQK 191
              SAQA LASA  +              +    AR   ++QAKA+L  A  N++  +  
Sbjct: 178 QLRSAQAGLASAQAQLEVAEQVQLQIRQQETNVEARERQVDQAKAQLETANLNLSYTE-- 235

Query: 192 LDELTILATRDGILDSLPYHLGERV-ANNAVVAIVQADRLPYARVYVPATHRAA----FV 246
                + A  DG++       G  V A  A+ ++V  +      V+V A  + +      
Sbjct: 236 -----VRAPFDGVVTKRNVQPGTLVQAGTALFSLVSPN------VWVVANFKESQLERMK 284

Query: 247 VGQTVTVHVDGIKD 260
            G  VTV VD   D
Sbjct: 285 PGDKVTVSVDAWPD 298