Pairwise Alignments

Query, 315 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 331 a.a., secretion protein HlyD from Escherichia coli ECRC62

 Score =  126 bits (317), Expect = 6e-34
 Identities = 88/269 (32%), Positives = 137/269 (50%), Gaps = 1/269 (0%)

Query: 45  IRELPIAEGEHVKVGDVLVKLDSQIQTTLLTQALAQQAKAQASLNKLTNGERPEDIAVAQ 104
           +  L + EG+ +K G VL +LD +     L QA A  + AQA  + +  G R E+IA A 
Sbjct: 54  VESLAVDEGDAIKAGQVLGELDHKPYEIALMQAKAGVSVAQAQYDLMLAGYRDEEIAQAA 113

Query: 105 ARVAKARAQHKEAELTLNRKAELVAKQLISQSEVDAARSARDSAQAELASAHEEFTKLTA 164
           A V +A+A +  A+   NR+  L   + IS ++++ ARS+RD AQA L SA ++  +  +
Sbjct: 114 AAVKQAQAAYDYAQNFYNRQQGLWKSRTISANDLENARSSRDQAQATLKSAQDKLRQYRS 173

Query: 165 GARIEDIEQAKAELAVAQANVTLQQQKLDELTILATRDGILDSLPYHLGERVANNAVVAI 224
           G R +DI QAKA L  AQA +   +  L + T++A  DG L +     G  +     V  
Sbjct: 174 GNREQDIAQAKASLEQAQAQLAQAELNLQDSTLIAPSDGTLLTRAVEPGTVLNEGGTVFT 233

Query: 225 VQADRLPYARVYVPATHRAAFVVGQTVTVHVDGIKDQ-YQGKIRWVANEPSFTPYYALTE 283
           V   R  + R YV   +      G+ V ++ DG  D+ Y G+I +V+    FTP    T 
Sbjct: 234 VSLTRPVWVRAYVDERNLDQAQPGRKVLLYTDGRPDKPYHGQIGFVSPTAEFTPKTVETP 293

Query: 284 KERSRLMYLAEVDLPESAMDLPSGLPAQV 312
             R+ L+Y   + + ++   L  G+P  V
Sbjct: 294 DLRTDLVYRLRIVVTDADDALRQGMPVTV 322