Pairwise Alignments

Query, 315 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 391 a.a., efflux transporter, RND family, MFP subunit from Bacteroides ovatus ATCC 8483

 Score = 52.4 bits (124), Expect = 2e-11
 Identities = 40/162 (24%), Positives = 70/162 (43%), Gaps = 29/162 (17%)

Query: 100 IAVAQARVAKARAQHKEAELTLNRKAELVAKQLISQSEVDAARSARDSAQAELASAHEEF 159
           +  A+A VA A A     ++T + K EL  KQ+IS  ++  A ++    +A+LA      
Sbjct: 96  VRTAKAAVATAEAAVSTQQMTYDNKKELNKKQIISDYDLAMAENSLAQTKAQLA------ 149

Query: 160 TKLTAGARIEDIEQAKAELAVAQANVTLQQQKLDELTILATRDGILDSLPYHLGERVANN 219
                        QAKA+L  AQ N++  Q K       +  DG+++++PY +G  V+ +
Sbjct: 150 -------------QAKAQLTTAQQNLSFTQVK-------SPSDGVINNIPYRVGALVSPS 189

Query: 220 AVVAIVQADRLPYARVYVPATHRAAFVV---GQTVTVHVDGI 258
               +     +    VY   T +    +   G T+   +  I
Sbjct: 190 IATPMTTVSEIDEVYVYFSMTEKELLAMTKSGSTIKEEISKI 231