Pairwise Alignments

Query, 315 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 332 a.a., putative membrane fusion protein (MFP) component of efflux pump, membrane anchor from Escherichia coli BL21

 Score =  126 bits (317), Expect = 6e-34
 Identities = 88/269 (32%), Positives = 137/269 (50%), Gaps = 1/269 (0%)

Query: 45  IRELPIAEGEHVKVGDVLVKLDSQIQTTLLTQALAQQAKAQASLNKLTNGERPEDIAVAQ 104
           +  L + EG+ +K G VL +LD +     L QA A  + AQA  + +  G R E+IA A 
Sbjct: 55  VESLAVDEGDAIKAGQVLGELDHKPYEIALMQAKAGVSVAQAQYDLMLAGYRDEEIAQAA 114

Query: 105 ARVAKARAQHKEAELTLNRKAELVAKQLISQSEVDAARSARDSAQAELASAHEEFTKLTA 164
           A V +A+A +  A+   NR+  L   + IS ++++ ARS+RD AQA L SA ++  +  +
Sbjct: 115 AAVKQAQAAYDYAQNFYNRQQGLWKSRTISANDLENARSSRDQAQATLKSAQDKLRQYRS 174

Query: 165 GARIEDIEQAKAELAVAQANVTLQQQKLDELTILATRDGILDSLPYHLGERVANNAVVAI 224
           G R +DI QAKA L  AQA +   +  L + T++A  DG L +     G  +     V  
Sbjct: 175 GNREQDIAQAKASLEQAQAQLAQAELNLQDSTLIAPSDGTLLTRAVEPGTVLNEGGTVFT 234

Query: 225 VQADRLPYARVYVPATHRAAFVVGQTVTVHVDGIKDQ-YQGKIRWVANEPSFTPYYALTE 283
           V   R  + R YV   +      G+ V ++ DG  D+ Y G+I +V+    FTP    T 
Sbjct: 235 VSLTRPVWVRAYVDERNLDQAQPGRKVLLYTDGRPDKPYHGQIGFVSPTAEFTPKTVETP 294

Query: 284 KERSRLMYLAEVDLPESAMDLPSGLPAQV 312
             R+ L+Y   + + ++   L  G+P  V
Sbjct: 295 DLRTDLVYRLRIVVTDADDALRQGMPVTV 323