Pairwise Alignments

Query, 315 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 350 a.a., Multidrug resistance protein MdtN from Alteromonas macleodii MIT1002

 Score = 98.6 bits (244), Expect = 2e-25
 Identities = 78/296 (26%), Positives = 139/296 (46%), Gaps = 12/296 (4%)

Query: 28  GTLERDRITFSATSNEIIRELPIAEGEHVKVGDVLVKLDSQIQTTLLTQALA--QQAKAQ 85
           G +E   I  SA     + E+ ++EG+ V  GDV+ KLD+    + L QA A  QQAK+ 
Sbjct: 37  GRIEATEIGISAKVAGRVEEIYVSEGDRVTAGDVVAKLDTTTINSQLQQAKAQHQQAKSA 96

Query: 86  ASLNKLTNGERPEDIAVAQARVAKARAQHKEAELTLNRKAELVAKQLISQSEVDAARSAR 145
                +   +R  + +  +A + + +A+ K AE    R  EL     +S+   +   +  
Sbjct: 97  VEAANMAVAQRQSEKSALEAALLQTKAELKAAEAHAARTNELAKTGAVSKQLAEDNLTNV 156

Query: 146 DSAQAELASAHEEFTKLTAGARIEDIEQAKAELAVAQANVTLQ--QQKLDELTILATRDG 203
           +SA+A + +A    T   A       +   A+ AV+ AN T+   Q +++++ + A R+G
Sbjct: 157 ESAKAAVNAAKARLTAADATIEASRAQYYSAQAAVSAANATIAQIQSEINDMVLKAPRNG 216

Query: 204 ILDSLPYHLGERV-ANNAVVAIVQADRLPYARVYVPATHRAAFVVGQTVTVHVDGIKD-Q 261
            +       GE V A   V+++V    + Y   ++PA+      +G    + +D   D  
Sbjct: 217 RIQYRVVEPGEVVGAGGRVLSLVDLTNV-YMTFFLPASQVGKLTMGGEALIVLDAAPDIA 275

Query: 262 YQGKIRWVANEPSFTPYYALTEKERSRLMYLAEVDLPESAM-----DLPSGLPAQV 312
               I +VA+   FTP    T+ ER +LM+  +  +PE+ +      + +GLP +V
Sbjct: 276 IPATISYVADVAQFTPKSVETQSEREKLMFRVKAQIPENLLKQHIEKVKTGLPGEV 331