Pairwise Alignments

Query, 315 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 432 a.a., HlyD family secretion protein from Agrobacterium fabrum C58

 Score = 57.0 bits (136), Expect = 8e-13
 Identities = 60/233 (25%), Positives = 102/233 (43%), Gaps = 42/233 (18%)

Query: 33  DRITFSATSNEIIRELPIAEGEHVKVGDVLVKLDSQIQTTLLTQALAQQAKAQASLNKLT 92
           D++  S+  +  +R++ +     VK GD+L +LD     T   +A  Q A+A+       
Sbjct: 89  DQVDISSELSGTVRKVNVTYNTPVKSGDILAELD-----TNKLEADVQSARAK------- 136

Query: 93  NGERPEDIAVAQARVAKARAQHKEAELTLNRKAELVAKQLISQSEVDAARSARDSAQAEL 152
                  +A A+A V KARA    A+ ++ R   LV  ++ SQ ++DAA+   D+A A L
Sbjct: 137 -------LASAKANVLKARADLGSAKTSMERLRSLVQSRVSSQQDLDAAQFTHDAAAATL 189

Query: 153 ASAHEEFTKLTAGARIEDIEQAKAELAVAQANVTLQQQKLDELTILATRDGILDSLPYHL 212
                              +  +A +  A+A++ L +  L +  I++  DG++ +     
Sbjct: 190 -------------------QVNEATVLSAEADLRLAEVNLGKAKIVSPIDGVILTRSVDP 230

Query: 213 GERVAN--NAVVAIVQADRLPYARVYVPATHRAAFVV--GQTVTVHVDGIKDQ 261
           G  VA+  NA V    A  L +  + V         V  GQ  T +VD   D+
Sbjct: 231 GATVASSLNAPVLFTIAGDLRHMELQVSVDEADVGKVETGQKATFNVDAYPDR 283