Pairwise Alignments

Query, 315 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 382 a.a., putative multidrug resistance protein EmrK from Acinetobacter radioresistens SK82

 Score = 82.4 bits (202), Expect = 2e-20
 Identities = 69/251 (27%), Positives = 119/251 (47%), Gaps = 34/251 (13%)

Query: 45  IRELPIAEGEHVKVGDVLVKLDSQIQTTLLTQALAQQAKAQASLNKLTNGE--------- 95
           + E+ + + + VK GDVLV++D +     L QA A+ AKA+   N+ +            
Sbjct: 77  VTEVLVKDTQQVKQGDVLVRIDPRDAKIALAQAQAELAKAKRQYNQTSANSQSLNSQVSV 136

Query: 96  RPEDIAVAQARVAKARAQHKEAELTLNRKAELVAKQLISQSEVDAARSARDSAQAELASA 155
           R ++IA AQA+V KA A   +A+    R+ +L     IS+ E+ +A++  D+A+A L  A
Sbjct: 137 RADEIASAQAQVKKAEADLAKAQADYERRRKLSETGAISKEEMSSAQTVLDTARASLTLA 196

Query: 156 HEEFTKLTAGARIED-------------IEQAKAELAVAQANVTLQQQKLDELTILATRD 202
               ++  A  +                 E++  ++ +AQA V      L+   + A  D
Sbjct: 197 QAGLSQAEANRKAAQSTLAANEALIRGATERSTPDVLIAQARVEQAMLDLERTEVHAPLD 256

Query: 203 GILDSLPYHLGERVA-NNAVVAIVQADRLPYARVYVPATHR----AAFVVGQTVTVHVDG 257
           G++      +G+RVA  N+++ +V     P A++YV A  +    A    GQ V +  D 
Sbjct: 257 GVVSRRNVQVGQRVAPGNSLMVVV-----PVAQLYVDANFKESQLAKVRTGQAVELISDF 311

Query: 258 IKDQ--YQGKI 266
             D+  Y GK+
Sbjct: 312 YGDEVVYHGKV 322