Pairwise Alignments

Query, 417 a.a., serine transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 409 a.a., putative transporter from Escherichia coli BL21

 Score =  263 bits (671), Expect = 9e-75
 Identities = 145/411 (35%), Positives = 244/411 (59%), Gaps = 14/411 (3%)

Query: 15  SSKWTQHDTYWLLSLFGTAVGAGILFLPINIGLGGFWPLVLMAVLAFPMTYLSHRGLARF 74
           S+ W++ +T W  +L+GTAVGAG LFLPI +G  G   L + A++A+P+TY  H+ L +F
Sbjct: 2   SNIWSKEETLWSFALYGTAVGAGTLFLPIQLGSAGAVVLFITALVAWPLTYWPHKALCQF 61

Query: 75  VLSSRRPNAD-FTDVVEEHFGQNAGRLISLLYFLSIFPILLIYGVGLTNTVDSFLVNQAD 133
           +LSS+    +  T  V  ++G+  G LI+ LYF++ F ++LIY V +TN++   L     
Sbjct: 62  ILSSKTSAGEGITGAVTHYYGKKIGNLITTLYFIAFFVVVLIYAVAITNSLTEQLAKHMV 121

Query: 134 MVSPPRALLSGALVFGLIAIMLSGEKIMLRAFAIMVYPLAAILALLSLYLIPYWS----M 189
           +    R L+S  +V  L  I L G    +R    +V+PL A    LS+YL+  W      
Sbjct: 122 IDLRIRMLVSLGVVLILNLIFLMGRHATIRVMGFLVFPLIAYFLFLSIYLVGSWQPDLLT 181

Query: 190 PSFDFPQTSDFLHTVWLAVPVVVFSFSHAAAISSFANIQRRHYGEQADQKSEQILRHTSV 249
              +F Q +  LH +W+++PV+VF+FSH   IS+FA  +R  YGE A  K ++I++   +
Sbjct: 182 TQVEFNQNT--LHQIWISIPVMVFAFSHTPIISTFAIDRREKYGEHAMDKCKKIMKVAYL 239

Query: 250 VLILFVLLFVFSCVLALSPQALQEAKAQNISVLTYLANVTDNP-FIATLGPLVAFIAITS 308
           ++ + VL FVFSC+L++ P  ++ AK + +++L+ L+ + + P +++  G +VA +A++ 
Sbjct: 240 IICISVLFFVFSCLLSIPPSYIEAAKEEGVTILSALSMLPNAPAWLSISGIIVAVVAMSK 299

Query: 309 SFLGHFLGARESLSGLLTKNL---GVSLRLAERLTIGFLFVTI--WIAAILNPSILGMME 363
           SFLG + G  E  + ++   L   GV    A    +  + V++  +I   +NP+ + M+ 
Sbjct: 300 SFLGTYFGVIEGATEVVKTTLQQVGVKKSRAFNRALSIMLVSLITFIVCCINPNAISMIY 359

Query: 364 ALSGPVIAMILFIMPMIAVFKVPALREHQKRFSTFFVLLVGLLAVSALLYS 414
           A+SGP+IAMILFIMP ++ + +PAL+   +       L+VG+L VS + +S
Sbjct: 360 AISGPLIAMILFIMPTLSTYLIPALKP-WRSIGNLITLIVGILCVSVMFFS 409