Pairwise Alignments

Query, 1176 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1203 a.a., hypothetical protein from Pseudomonas simiae WCS417

 Score =  244 bits (622), Expect = 4e-68
 Identities = 296/1255 (23%), Positives = 537/1255 (42%), Gaps = 195/1255 (15%)

Query: 9    PNEQAYVEQKSTVTIAVLKEIWMPYWGGTGQEPI-GIEHDFASGIAKELGINIEYKGFDT 67
            P  +A++  +  VT A+ +  W P   G  Q    G+  D+   I    GI ++   F +
Sbjct: 48   PQTRAWLSNRPEVTAAIWRGAWPPLHMGFEQNQFEGVAADYLGVIQAATGIRLKVLRFAS 107

Query: 68   IEALLNAVSTGKADMAIGFGQTLAREGKFLFSKPLYENVRVIWLR--DKAMEEKPFASLK 125
                  A+  G+ DM      +  +EG    S+P   N +VI  R  +        A  +
Sbjct: 108  RAEAREALLQGRVDMLALHDVSEGQEGAITQSRPYLLNNKVIAHRIGETRQLSSDLAGQR 167

Query: 126  WVCIQGTSYCEILKDRGYPN--IIMARNYSSSVEMIRQGIADATVTNYVSLNHYLSQKRL 183
               +   +   +LK + YP   +I   N+ + +  +    ADA +T+ V +  YL     
Sbjct: 168  LAYVGDDAVGALLKQQ-YPKATLIQYTNHLNGLTSLIYEQADAFLTDAV-VGEYLI---- 221

Query: 184  ALGKVIFDPDLGVQTN--------RILINNNEPLLLSAINKVIDA----DKQGLTENKLN 231
               +V+++ D+ +  +           +++ +P LL+AIN  ++A    D + +T ++  
Sbjct: 222  ---RVLYNNDIYIAGDATTTSADINFAVSDRKPQLLAAINDTLNALPQNDMKRIT-SRWG 277

Query: 232  SADVYFLNDQANLNILRNENV----NPVVRYTIQDDLFPMSYWDEKEKKYKGYVHDLLER 287
              D +F+ D++ L +   E      +  ++  +     P+S++D+  +  +G   DLL  
Sbjct: 278  LGD-HFVADRSPLELTSEELTWIENHKKIKVVLAASYAPLSFYDQNNR-LQGLTADLLAI 335

Query: 288  ISTKSILKFEFVPAYGRDVEDMLRH---GKVDLIPSFNMTYVDDRYFIHTGRYTDIQFGY 344
            ++ ++ L+ + V +    V +ML+     +VDLI + ++               D++   
Sbjct: 336  LAQRTGLEIDVVRS--DSVSNMLKRLEDNQVDLIAALSIG--------------DLRLNP 379

Query: 345  IETTRPYT-----------TPITGILDRTGKFNAYIAVQKNLS-----------DVKVYR 382
             + TRPYT           +PI  + +  GK  A I V   L+            V V  
Sbjct: 380  SQYTRPYTVSPFVVITKRQSPIRDLSELNGKRLA-IPVGNPLTKWLQQQHPGVIQVPVET 438

Query: 383  SMYDLEQALEKGDITHGLLNKVLINQMLLDGHQDAFKLSPLTEGQDLRADMTMLVRKDAR 442
            +   +E  +  GD+T  +  ++  +  +    +    +S +      R  + M+V  +  
Sbjct: 439  AARGVE-LVSNGDVTASVHTQLGADYFIKHHFRSDLMISGMVGPNPAR--IGMVVSTEDM 495

Query: 443  GLQNMLQKVLATFSQQEIDEIKGAYDR---VTVYFGYDKQKVLIYALIILCALLSIGLIL 499
             L++++ KVL     +E   +   +       V   +   K  +Y +I +  L  +  ++
Sbjct: 496  PLKSIINKVLLEIPPEEFKTLSDRWRNHAAPAVASSWSTYKSSVYKVIGVALLFLLAFLI 555

Query: 500  TLSLSRLRGKLRSSEQVAKLSTEQLRWLTELLDAIPSMIFISDAKGEVVLTNAAYRKIYH 559
                  L+ +++  ++     ++QL +   L+D  P  +++ D  G++V  N AY +   
Sbjct: 556  WNYY--LQAQIKKRKRAETALSDQLSFSKTLIDGSPIALYVRDKAGKLVHCNRAYLEFLQ 613

Query: 560  TCCEKGCVQPQPECSFLALPDQHEAEFSIIIQAPKSNCSIGEHYFHVTRRAISHPINQRK 619
               E    +  P+   L  P    A++  I Q  +           +  +   H I    
Sbjct: 614  ITHEDVLGKTLPDAEIL--PVSLSAQYDQIYQNSEQGAEPAFADLEIEVQGQPHRI---- 667

Query: 620  YYLTL---------------FNDITELKETEQALRQSNEQALQAVEARNHFLAVVSHELR 664
            Y+ TL               + DI+E ++  + LR + + A +A E+++ FLA +SHE+R
Sbjct: 668  YHWTLPFQSSAGEFSGVIGGWLDISEREQLVEQLRVAKQAADEANESKSIFLASMSHEIR 727

Query: 665  TPIAAMLGLMEILASRLKSSESQLLLTN---AISSAERLKLHVNDILDFSKIEAQQLQLD 721
            TPI+A++GL+E+L  R++    Q +  N   A  SA+ L   + DILD SKIEA  + L 
Sbjct: 728  TPISALIGLIEML--RVRGGTPQQINDNLAVAHESAQSLLSLIGDILDLSKIEAGAMVLS 785

Query: 722  IGLYNLADELGPLLRGFEASAQLKEIEFDVIWSPNSLLLANFDALRFNQIVTNLLSNAIK 781
                 L++ L  + + FE +A+ K + FD+I       +   DAL  NQI+ NL+SNAIK
Sbjct: 786  PRPTRLSELLHSVHKLFEINARNKHLTFDLIIDVQDQHVI-IDALMLNQIIANLVSNAIK 844

Query: 782  FTDQGRVVFKIDVAPE-------MLTIVVEDTGCGMTQTQIESLFVPFAQADSTITRRFG 834
            FT+QG V   +  +P           I V D+G G+ + Q +++F PF Q  S  T    
Sbjct: 845  FTEQGFVQLSLKQSPNDSESNLARYVIEVRDSGLGLNEQQKKAIFEPFVQVVSAPTST-R 903

Query: 835  GTGLGMSIVANLIELMNGKIEVKSEFEQGTQIQVNLPLVTQTCDEFRGQVVAMSYRSPYM 894
            GTGLG+SI   L +L+  ++ V S+ ++G+  ++                          
Sbjct: 904  GTGLGLSICMRLAQLLEAQLSVDSQPDKGSSFKLQF------------------------ 939

Query: 895  LWAKALGMRVEENEEWVEQSGHNIYPDLLLNRLREVSNLTQAQTEPAHSRLLQGHVLVAD 954
                       E E  + +               +V   TQ Q  PA   L   ++LVA+
Sbjct: 940  -----------EAERTLPE---------------DVQESTQPQA-PAGMSL---NILVAE 969

Query: 955  DDAINRLLIKKQLSELGLSATLVSDGLQAFEKLSQHPEQYDLLITDCHMPHLDGFALTRK 1014
            D A NRLL+ +QL  LG +A    DG  A  +       +DL ITDC+MPH+DG+ LTR+
Sbjct: 970  DHAANRLLLCQQLEYLGHNAIPCDDGETALAQWQAADPPFDLTITDCNMPHMDGYELTRR 1029

Query: 1015 VK---QEISLFKGAVVGCTAEDSRLAAEQALQAGMDKVIYKPYTLANLRKVLSRYLTTQW 1071
            ++   Q   L    + G TA       +  L AGM + ++KP  +    ++L+  +    
Sbjct: 1030 IRTLEQSRGLGLHPIFGLTANAQSHIIQDCLDAGMTQCLFKPIGI----EILAEQIYAVT 1085

Query: 1072 VALPEQSWLDAYQEEEREEMAMVVAESLA-----------QDIA-----LLNQPDCDVKA 1115
              +  Q    +    E E++ ++  ++ +           QD A     L+N     +  
Sbjct: 1086 AQIERQVKAASTTGGELEKLRILCPDAYSPLVEELINTNRQDAARLEQMLINNELKKISG 1145

Query: 1116 LAHRIKGAAGSLQLQRLADLAKTVEKQNDPQQLVADKQQLINAMHEVVEQAQQWL 1170
            LAH+IKG A     + L +    +E         A ++Q+   +  ++   Q+ L
Sbjct: 1146 LAHKIKGGAQLADARNLIEACMQLESLAHLDDANACEEQIKTVIQIMLSLEQELL 1200