Pairwise Alignments

Query, 1176 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 928 a.a., histidine kinase from Pseudomonas simiae WCS417

 Score =  191 bits (486), Expect = 2e-52
 Identities = 155/508 (30%), Positives = 239/508 (47%), Gaps = 70/508 (13%)

Query: 622  LTLFNDITELKETEQALRQSNEQALQAVEARNHFLAVVSHELRTPIAAMLGLMEILA-SR 680
            L  F+DI+   + E AL Q+ + A  A EA+  FLA +SHE+RTP+  +LG +E+LA +R
Sbjct: 420  LCAFSDISARTQIEAALEQARQSADAANEAKTLFLATMSHEIRTPLYGVLGTLELLARTR 479

Query: 681  LKSSESQLLLTNAISSAERLKLHVNDILDFSKIEAQQLQLDIGLYNLADELGPLLRGFEA 740
            L + +   L     SSA  L+L + D+LD SKIEA QL L++  + +   +  +++G+ A
Sbjct: 480  LDAQQKSYLHAIEGSSATLLQL-ICDVLDVSKIEAGQLALELSEFCVPTLVQEVVQGYAA 538

Query: 741  SAQLKEIEFDVIWSPNSLLLANFDALRFNQIVTNLLSNAIKFTDQGRVVFKI-----DVA 795
            +A  K ++      P        DA R  QI+ NLLSNA+KFTD GRVV ++     +  
Sbjct: 539  AAHSKGLQLYACLDPQLPRRLIGDASRVRQILNNLLSNAVKFTDSGRVVLRVKKLGREGE 598

Query: 796  PEMLTIVVEDTGCGMTQTQIESLFVPFAQADSTITRRFGGTGLGMSIVANLIELMNGKIE 855
               L   + DTG G+       +F PF Q++   +    GTGLG+ I   L  LMNG + 
Sbjct: 599  RVCLQWQISDTGKGIAPADQAFIFEPFYQSEGN-SHVIAGTGLGLPICLRLTHLMNGTLR 657

Query: 856  VKSEFEQGTQIQVNLPLVTQTCDEFRGQVVAMSYRSPYML------------WAKALGMR 903
            + SE   G+   + +PL  Q        + A++    Y+L            W +  G R
Sbjct: 658  MVSEPGLGSSFSLTVPL-EQPSGNAPQSLQALAPEIVYVLSPIRELADSLCGWLRRWGAR 716

Query: 904  VEENEEWVEQ-SGHNIYPDLLLNRL----------------------------------- 927
             +       Q +GH +  +L+  RL                                   
Sbjct: 717  AQVGLPTSTQLAGHCVLLELMERRLDLPWQGPRVLASNDGAHEPQFNGDGWQVNLNDLDA 776

Query: 928  --REVSNLTQAQTEPAHSRL-------LQGHVLVADDDAINRLLIKKQLSELGLSATLVS 978
              + V +    Q  P  +R        L  H+LVA+D+ IN+L+++ QL ELG S  L  
Sbjct: 777  IQQAVRHAQNGQVVPPQTRCEARDLRPLHLHILVAEDNVINQLILRDQLEELGCSVELAG 836

Query: 979  DGLQAFEKLSQHPEQYDLLITDCHMPHLDGFALTRKVKQEISLFKGAVVGCTAEDSRLAA 1038
            DG  A  +   H   +D+++TD +MP L+G+ L   +++        ++G TA   R   
Sbjct: 837  DGEDALAR--WHEGTFDVVLTDVNMPRLNGYELAEALRR--LGCTTPIIGATANALRGEE 892

Query: 1039 EQALQAGMDKVIYKPYTLANLRKVLSRY 1066
               L AGM+  + KP+TL  L  VL+ Y
Sbjct: 893  ALCLAAGMNHCLVKPFTLRALSTVLAPY 920