Pairwise Alignments

Query, 1176 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 633 a.a., histidine kinase from Pseudomonas simiae WCS417

 Score =  189 bits (479), Expect = 8e-52
 Identities = 129/445 (28%), Positives = 220/445 (49%), Gaps = 63/445 (14%)

Query: 632  KETEQALRQ---SNEQALQAVEARNHFLAVVSHELRTPIAAMLGLMEILASRLKSSESQL 688
            +E +QA+ Q   + E+A +A  A++ FLA++SHELRTP+  +LG++++L +   + E   
Sbjct: 242  REQQQAMAQLIQTREEAERANNAKSDFLAMMSHELRTPMNGVLGMLQLLETTEMTEEQTE 301

Query: 689  LLTNAISSAERLKLHVNDILDFSKIEAQQLQLDIGLYNLADELGPLLRGFEASAQLKEIE 748
                A  S E L   +NDILDFS+IE   L+L+   +NLAD +    + F+ SAQ + + 
Sbjct: 302  YAALASESTEHLLKVINDILDFSRIERAALELEHIPFNLADLINSCAQAFQHSAQQRGLA 361

Query: 749  FDVIWSPN-SLLLANFDALRFNQIVTNLLSNAIKFTDQGRVVFK-----IDVAPEMLTIV 802
             ++   P    L    D  R  QI+ NL+ NA+KFT+ G V  +     +D      T  
Sbjct: 362  LELSIPPGMDTLRVQGDPTRIRQILVNLIGNALKFTEHGNVSIEPHWQTLDHELVWFTCT 421

Query: 803  VEDTGCGMTQTQIESLFVPFAQADSTITRRFGGTGLGMSIVANLIELMNGKIEVKSEFEQ 862
            V D+G G++  ++E +F  F QADS+I+RR+GGTGLG+ I   L E M G +  +SE   
Sbjct: 422  VRDSGIGISAERLELMFDAFQQADSSISRRYGGTGLGLPIARTLAERMGGTLRAQSE--- 478

Query: 863  GTQIQVNLPLVTQTCDEFRGQVVAMSYRSPYMLWAKALGMRVEENEEWVEQSGHNIYPDL 922
                            E RG V  +            + + ++++               
Sbjct: 479  ----------------EARGSVFTLE-----------IPLAIDQHS-------------- 497

Query: 923  LLNRLREVSNLTQAQTEPAHSRLLQGHVLVADDDAINRLLIKKQLSELGLSATLVSDGLQ 982
                +  +++    +T     R    HVL+ +D+ +NR +++  L  LG   +L +DG +
Sbjct: 498  ----VPAIASDADGKTGAGDGR----HVLLVEDNPVNRAVVEAMLRSLGFEVSLATDGAE 549

Query: 983  AFEKLSQHPEQYDLLITDCHMPHLDGFALTRKVKQEISLFKGAVVGCTAEDSRLAAEQAL 1042
            A    S     +  ++ DC +P +DG+  TR+++Q        ++  TA   +   E  L
Sbjct: 550  AIR--SAESLIFTAILMDCRLPVIDGYEATRQIRQLPGCADLPIIALTANALQGDREACL 607

Query: 1043 QAGMDKVIYKPYTLANLRKVLSRYL 1067
             AGM+  + KP+   +L+++L R++
Sbjct: 608  AAGMNDYLAKPFKRTDLQQILQRWV 632